ENSMUSG00000053293


Mus musculus

Features
Gene ID: ENSMUSG00000053293
  
Biological name :Pom121
  
Synonyms : nuclear pore membrane protein 121 / Pom121 / Q8K3Z9
  
Possible biological names infered from orthology : POM121C / POM121 transmembrane nucleoporin / POM121 transmembrane nucleoporin C / Q96HA1
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: G2
Gene start: 135376141
Gene end: 135394546
  
Corresponding Affymetrix probe sets: 10534441 (MoGene1.0st)   1420004_s_at (Mouse Genome 430 2.0 Array)   1427886_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000106801
NCBI entrez gene - 107939     See in Manteia.
MGI - MGI:2137624
RefSeq - XM_006504334
RefSeq - NM_148932
RefSeq Peptide - NP_683734
swissprot - Q3U425
swissprot - Q8K3Z9
Ensembl - ENSMUSG00000053293
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pom121ENSDARG00000055113Danio rerio
 ENSGALG00000029674Gallus gallus
 POM121ENSG00000196313Homo sapiens
 POM121CENSG00000272391Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5SW25 / Pom121l2 / POM121 membrane glycoprotein-like 2 (rat) / Q96KW2* / POM121 transmembrane nucleoporin like 2*ENSMUSG0000001698226
Pom121l12 / Q8N7R1* / POM121 transmembrane nucleoporin like 12*ENSMUSG000000841357


Protein motifs (from Interpro)
Interpro ID Name
 IPR026054  Nuclear pore complex protein
 IPR026090  Nuclear pore protein POM121


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006405 RNA export from nucleus IBA
 biological_processGO:0006606 protein import into nucleus IBA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005643 nuclear pore IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 molecular_functionGO:0008139 nuclear localization sequence binding IBA
 molecular_functionGO:0017056 structural constituent of nuclear pore IBA


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
Regulation of Glucokinase by Glucokinase Regulatory Protein
snRNP Assembly
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
Regulation of HSF1-mediated heat shock response
SUMOylation of SUMOylation proteins
SUMOylation of chromatin organization proteins
SUMOylation of RNA binding proteins
SUMOylation of DNA replication proteins
Transcriptional regulation by small RNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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