ENSMUSG00000055401


Mus musculus

Features
Gene ID: ENSMUSG00000055401
  
Biological name :Fbxo6
  
Synonyms : F-box only protein 6 / Fbxo6 / Q9QZN4
  
Possible biological names infered from orthology : F-box protein 6 / Q9NRD1
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: E2
Gene start: 148145716
Gene end: 148152140
  
Corresponding Affymetrix probe sets: 10518473 (MoGene1.0st)   1417501_at (Mouse Genome 430 2.0 Array)   1447671_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000120801
Ensembl peptide - ENSMUSP00000121379
Ensembl peptide - ENSMUSP00000130188
Ensembl peptide - ENSMUSP00000123132
Ensembl peptide - ENSMUSP00000030858
Ensembl peptide - ENSMUSP00000062348
Ensembl peptide - ENSMUSP00000101331
Ensembl peptide - ENSMUSP00000120431
NCBI entrez gene - 50762     See in Manteia.
MGI - MGI:1354743
RefSeq - NM_001163706
RefSeq - NM_001163707
RefSeq - NM_015797
RefSeq - NM_001163704
RefSeq - NM_001163705
RefSeq Peptide - NP_001157177
RefSeq Peptide - NP_001157179
RefSeq Peptide - NP_056612
RefSeq Peptide - NP_001157176
RefSeq Peptide - NP_001157178
swissprot - Z4YN00
swissprot - A2A7H1
swissprot - A2A7G9
swissprot - Q9QZN4
swissprot - A2A7H3
Ensembl - ENSMUSG00000055401
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fbxo44ENSDARG00000022623Danio rerio
 si:dkey-147f3.4ENSDARG00000071029Danio rerio
 si:dkey-147f3.4ENSDARG00000092077Danio rerio
 si:rp71-1k13.6ENSDARG00000115843Danio rerio
 si:rp71-1k13.6ENSDARG00000092166Danio rerio
 zgc:100832ENSDARG00000012035Danio rerio
 zgc:114081ENSDARG00000057899Danio rerio
 zgc:114174ENSDARG00000057884Danio rerio
 zgc:153722ENSDARG00000071044Danio rerio
 zgc:173570ENSDARG00000037645Danio rerio
 ENSGALG00000004646Gallus gallus
 FBXO6ENSG00000116663Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Fbxo44 / F-box protein 44 / Q9H4M3*ENSMUSG0000002900158
Fbxo2 / Q80UW2 / F-box only protein 2 / Q9UK22* / F-box protein 2*ENSMUSG0000004155642
Fbxo27 / Q6DIA9 / Mus musculus F-box protein 27 (Fbxo27), transcript variant 3, mRNA. / Q8NI29* / F-box protein 27*ENSMUSG0000003746334
Fbxo17 / Q9QZM8 / F-box only protein 17 / Q96EF6* / F-box protein 17*ENSMUSG0000003059828
Nccrp1 / non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) / Q6ZVX7*ENSMUSG0000004758621


Protein motifs (from Interpro)
Interpro ID Name
 IPR001810  F-box domain
 IPR007397  F-box associated (FBA) domain
 IPR008979  Galactose-binding-like domain superfamily
 IPR036047  F-box-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006516 glycoprotein catabolic process IDA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0006986 response to unfolded protein IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0030433 ubiquitin-dependent ERAD pathway IMP
 biological_processGO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process ISO
 biological_processGO:0097466 ubiquitin-dependent glycoprotein ERAD pathway IC
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0019005 SCF ubiquitin ligase complex ISO
 cellular_componentGO:0044322 endoplasmic reticulum quality control compartment IDA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity ISO
 molecular_functionGO:0005515 protein binding IDA
 molecular_functionGO:0030246 carbohydrate binding IDA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IDA


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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