ENSMUSG00000055670


Mus musculus

Features
Gene ID: ENSMUSG00000055670
  
Biological name :Zzef1
  
Synonyms : Q5SSH7 / zinc finger, ZZ-type with EF hand domain 1 / Zzef1
  
Possible biological names infered from orthology : O43149 / zinc finger ZZ-type and EF-hand domain containing 1
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B4
Gene start: 72796226
Gene end: 72927120
  
Corresponding Affymetrix probe sets: 10378154 (MoGene1.0st)   1434192_at (Mouse Genome 430 2.0 Array)   1438691_at (Mouse Genome 430 2.0 Array)   1453583_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000130515
Ensembl peptide - ENSMUSP00000147028
Ensembl peptide - ENSMUSP00000068790
NCBI entrez gene - 195018     See in Manteia.
MGI - MGI:2444286
RefSeq - XM_006532601
RefSeq - XM_006532602
RefSeq - NM_001045536
RefSeq Peptide - NP_001039001
swissprot - Q5SSH7
swissprot - E9Q5W5
swissprot - A0A140LJ04
Ensembl - ENSMUSG00000055670
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zzef1ENSDARG00000094380Danio rerio
 ZZEF1ENSGALG00000001546Gallus gallus
 ZZEF1ENSG00000074755Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cul9 / cullin 9 / Q8IWT3*ENSMUSG0000004032714
Cul7 / Q8VE73 / Cullin-7 / Q14999*ENSMUSG000000385459


Protein motifs (from Interpro)
Interpro ID Name
 IPR000433  Zinc finger, ZZ-type
 IPR002048  EF-hand domain
 IPR004939  APC10/DOC domain
 IPR008979  Galactose-binding-like domain superfamily
 IPR011992  EF-hand domain pair
 IPR035914  Spermadhesin, CUB domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000124 absent teeth "missing bony structures of the upper and lower jaws used in mastication" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:61295]
Show

Allelic Composition: Srd5a3tm1b(EUCOMM)Wtsi/Srd5a3tm1b(EUCOMM)Wtsi
Genetic Background: B6N(Cg)-Srd5a3tm1b(EUCOMM)Wtsi/J

 MP:0002702 decreased circulating free fatty acid level "lower than normal levels of unesterified fatty acids in the blood" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Srd5a3tm1b(EUCOMM)Wtsi/Srd5a3tm1b(EUCOMM)Wtsi
Genetic Background: B6N(Cg)-Srd5a3tm1b(EUCOMM)Wtsi/J

 MP:0003063 increased coping response "enhanced ability to respond productively to a stressful situation" [RGD:Rat Genome Database submission]
Show

Allelic Composition: Srd5a3tm1b(EUCOMM)Wtsi/Srd5a3tm1b(EUCOMM)Wtsi
Genetic Background: B6N(Cg)-Srd5a3tm1b(EUCOMM)Wtsi/J

 MP:0005561 increased mean corpuscular hemoglobin "greater than the average levels of hemoglobin contained in an erythrocyte" [RGD:Rat Genome Database submission, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Srd5a3tm1b(EUCOMM)Wtsi/Srd5a3tm1b(EUCOMM)Wtsi
Genetic Background: B6N(Cg)-Srd5a3tm1b(EUCOMM)Wtsi/J

 MP:0005627 increased circulating potassium level "greater than the normal concentration in the blood of this alkaline metallic element, the most abundant intracellular ion; anomalies in the extracellular (circulating) concentration have important implications for the function of excitable tissues, such as nerve and muscle" [RGD:Rat Genome Database submission]
Show

Allelic Composition: Srd5a3tm1b(EUCOMM)Wtsi/Srd5a3tm1b(EUCOMM)Wtsi
Genetic Background: B6N(Cg)-Srd5a3tm1b(EUCOMM)Wtsi/J

 MP:0010025 decreased total body fat amount "less than the normal total amount of connective tissue composed of fat cells within the entire body" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Srd5a3tm1b(EUCOMM)Wtsi/Srd5a3tm1b(EUCOMM)Wtsi
Genetic Background: B6N(Cg)-Srd5a3tm1b(EUCOMM)Wtsi/J

 MP:0010053 decreased grip strength "reduced ability to grasp and hold objects, often measured as time spent hanging from an object or wire" [ISBN:0471316393 "Crawley, JN, What s Wrong with my Mouse: Behavioral Phenotyping of Transgenic and Knockout Mice"]
Show

Allelic Composition: Srd5a3tm1b(EUCOMM)Wtsi/Srd5a3tm1b(EUCOMM)Wtsi
Genetic Background: B6N(Cg)-Srd5a3tm1b(EUCOMM)Wtsi/J

 MP:0011396 abnormal sleep behavior "any anomaly in the actions, reactions, or performance of an organism during a periodic, readily reversible state of reduced awareness and metabolic activity" [MGI:smb]
Show

Allelic Composition: Srd5a3tm1b(EUCOMM)Wtsi/Srd5a3tm1b(EUCOMM)Wtsi
Genetic Background: B6N(Cg)-Srd5a3tm1b(EUCOMM)Wtsi/J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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