ENSMUSG00000056209


Mus musculus

Features
Gene ID: ENSMUSG00000056209
  
Biological name :Npm3
  
Synonyms : Npm3 / Nucleoplasmin-3 / Q9CPP0
  
Possible biological names infered from orthology : nucleophosmin/nucleoplasmin 3 / O75607
  
Species: Mus musculus
  
Chr. number: 19
Strand: -1
Band: C3
Gene start: 45747734
Gene end: 45749591
  
Corresponding Affymetrix probe sets: 10468081 (MoGene1.0st)   10539574 (MoGene1.0st)   1423522_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000069578
NCBI entrez gene - 18150     See in Manteia.
MGI - MGI:894653
RefSeq - NM_008723
RefSeq Peptide - NP_032749
swissprot - Q9CPP0
Ensembl - ENSMUSG00000056209
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 npm3ENSDARG00000103594Danio rerio
 NPM3ENSGALG00000032329Gallus gallus
 NPM3ENSG00000107833Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Npm1 / Q61937 / nucleophosmin 1ENSMUSG0000005711330
Npm2 / Q80W85 / Nucleoplasmin-2 / Q86SE8* / nucleophosmin/nucleoplasmin 2*ENSMUSG0000004791127


Protein motifs (from Interpro)
Interpro ID Name
 IPR004301  Nucleoplasmin family
 IPR024057  Nucleoplasmin core domain
 IPR036824  Nucleoplasmin core domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing IDA
 biological_processGO:0009303 rRNA transcription IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0005560 decreased circulating glucose level "less than the normal concentration in the blood of this major monosaccharide of the body; it is an important energy source" [RGD:Rat Genome Database submission, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Npc1tm1b(EUCOMM)Hmgu/Npc1+
Genetic Background: C57BL/6N-Npc1tm1b(EUCOMM)Hmgu/H

 MP:0011275 abnormal behavioral response to light "unexpected change in the activity of an organism (in terms of movement, outward responses) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light" [GO:0009416, MGI:llw2]
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Allelic Composition: Npc1tm1b(EUCOMM)Hmgu/Npc1+
Genetic Background: C57BL/6N-Npc1tm1b(EUCOMM)Hmgu/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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