ENSMUSG00000057278


Mus musculus

Features
Gene ID: ENSMUSG00000057278
  
Biological name :Snrpg
  
Synonyms : P62309 / Small nuclear ribonucleoprotein G / Snrpg
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: D1
Gene start: 86371304
Gene end: 86379328
  
Corresponding Affymetrix probe sets: 10449242 (MoGene1.0st)   10539705 (MoGene1.0st)   1448357_at (Mouse Genome 430 2.0 Array)   1448358_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000086987
NCBI entrez gene - 68011     See in Manteia.
MGI - MGI:1915261
RefSeq - NM_026506
RefSeq Peptide - NP_080782
swissprot - P62309
Ensembl - ENSMUSG00000057278
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snrpgENSDARG00000099667Danio rerio
 SNRPGENSGALG00000028409Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm8186 / P62309 / predicted gene 8186ENSMUSG00000049124100


Protein motifs (from Interpro)
Interpro ID Name
 IPR001163  LSM domain, eukaryotic/archaea-type
 IPR010920  LSM domain superfamily
 IPR034098  Small nuclear ribonucleoprotein G


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000387 spliceosomal snRNP assembly ISS
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005682 U5 snRNP IBA
 cellular_componentGO:0005683 U7 snRNP ISS
 cellular_componentGO:0005685 U1 snRNP IEA
 cellular_componentGO:0005686 U2 snRNP IBA
 cellular_componentGO:0005687 U4 snRNP IBA
 cellular_componentGO:0005689 U12-type spliceosomal complex IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISS
 cellular_componentGO:0034709 methylosome ISS
 cellular_componentGO:0034719 SMN-Sm protein complex IBA
 cellular_componentGO:0043186 P granule IBA
 cellular_componentGO:0071004 U2-type prespliceosome IBA
 cellular_componentGO:0071011 precatalytic spliceosome IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IBA
 cellular_componentGO:0097526 spliceosomal tri-snRNP complex IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:1990446 U1 snRNP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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