ENSGALG00000028409


Gallus gallus

Features
Gene ID: ENSGALG00000028409
  
Biological name :SNRPG
  
Synonyms : small nuclear ribonucleoprotein polypeptide G / SNRPG
  
Possible biological names infered from orthology : Gm8186 / P62308 / P62309 / predicted gene 8186 / Small nuclear ribonucleoprotein G
  
Species: Gallus gallus
  
Chr. number: 22
Strand: -1
Band:
Gene start: 3583762
Gene end: 3585400
  
Corresponding Affymetrix probe sets: Gga.17013.1.S1_a_at (Chicken Array)   Gga.17013.2.S1_x_at (Chicken Array)   Gga.17729.1.A1_at (Chicken Array)   Gga.17729.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000039728
NCBI entrez gene - 107048994     See in Manteia.
NCBI entrez gene - 771344     See in Manteia.
RefSeq - NM_001302092
RefSeq Peptide - NP_001289021
swissprot - E1C8V9
Ensembl - ENSGALG00000028409
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snrpgENSDARG00000099667Danio rerio
 SNRPGENSG00000143977Homo sapiens
 Gm8186ENSMUSG00000049124Mus musculus
 SnrpgENSMUSG00000057278Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001163  LSM domain, eukaryotic/archaea-type
 IPR010920  LSM domain superfamily
 IPR017132  Sm-like protein Lsm7


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000387 spliceosomal snRNP assembly IEA
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005682 U5 snRNP IBA
 cellular_componentGO:0005685 U1 snRNP IBA
 cellular_componentGO:0005686 U2 snRNP IBA
 cellular_componentGO:0005687 U4 snRNP IBA
 cellular_componentGO:0005689 U12-type spliceosomal complex IBA
 cellular_componentGO:0034719 SMN-Sm protein complex IBA
 cellular_componentGO:0043186 P granule IBA
 cellular_componentGO:0071004 U2-type prespliceosome IBA
 cellular_componentGO:0071011 precatalytic spliceosome IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IBA
 cellular_componentGO:0097526 spliceosomal tri-snRNP complex IBA
 molecular_functionGO:0003723 RNA binding IBA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
SLBP independent Processing of Histone Pre-mRNAs
snRNP Assembly
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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