ENSMUSG00000058297


Mus musculus

Features
Gene ID: ENSMUSG00000058297
  
Biological name :Spock2
  
Synonyms : Q9ER58 / Spock2 / Testican-2
  
Possible biological names infered from orthology : Q92563 / SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: B4
Gene start: 60106219
Gene end: 60135198
  
Corresponding Affymetrix probe sets: 10363415 (MoGene1.0st)   1435026_at (Mouse Genome 430 2.0 Array)   1450451_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000113115
Ensembl peptide - ENSMUSP00000127155
NCBI entrez gene - 94214     See in Manteia.
MGI - MGI:1891351
RefSeq - XM_017314167
RefSeq - NM_052994
RefSeq - XM_006514347
RefSeq Peptide - NP_443720
swissprot - Q9ER58
swissprot - F6SLR4
Ensembl - ENSMUSG00000058297
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 spock2ENSDARG00000075393Danio rerio
 Q92563ENSG00000107742Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BKV0 / Spock3 / Testican-3 / Q9BQ16* / SPARC/osteonectin, cwcv and kazal like domains proteoglycan 3*ENSMUSG0000005416245
Spock1 / sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1 / Q08629*ENSMUSG0000005622245


Protein motifs (from Interpro)
Interpro ID Name
 IPR000716  Thyroglobulin type-1
 IPR002350  Kazal domain
 IPR011992  EF-hand domain pair
 IPR019577  SPARC/Testican, calcium-binding domain
 IPR036058  Kazal domain superfamily
 IPR036857  Thyroglobulin type-1 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0010811 positive regulation of cell-substrate adhesion IDA
 biological_processGO:0019800 peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan IDA
 biological_processGO:0030198 extracellular matrix organization IDA
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEP
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005539 glycosaminoglycan binding IDA
 molecular_functionGO:0050840 extracellular matrix binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr