ENSMUSG00000058546


Mus musculus

Features
Gene ID: ENSMUSG00000058546
  
Biological name :Rpl23a
  
Synonyms : P62751 / ribosomal protein L23A / Rpl23a
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: B5
Gene start: 78180932
Gene end: 78183584
  
Corresponding Affymetrix probe sets: 10346105 (MoGene1.0st)   10350990 (MoGene1.0st)   10361816 (MoGene1.0st)   10371265 (MoGene1.0st)   10371267 (MoGene1.0st)   10371269 (MoGene1.0st)   10371275 (MoGene1.0st)   10388776 (MoGene1.0st)   10388784 (MoGene1.0st)   10414078 (MoGene1.0st)   10421707 (MoGene1.0st)   10579657 (MoGene1.0st)   10598103 (MoGene1.0st)   10598831 (MoGene1.0st)   1426659_a_at (Mouse Genome 430 2.0 Array)   1426660_x_at (Mouse Genome 430 2.0 Array)   1437975_a_at (Mouse Genome 430 2.0 Array)   1437976_x_at (Mouse Genome 430 2.0 Array)   1438927_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000099541
NCBI entrez gene - 268449     See in Manteia.
MGI - MGI:3040672
RefSeq - NM_207523
RefSeq Peptide - NP_997406
swissprot - P62751
swissprot - Q5M9M5
Ensembl - ENSMUSG00000058546
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl23aENSDARG00000006316Danio rerio
 RPL23AENSGALG00000003966Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm6096ENSMUSG0000007838080


Protein motifs (from Interpro)
Interpro ID Name
 IPR001014  Ribosomal protein L23/L25, conserved site
 IPR005633  Ribosomal protein L23/L25, N-terminal
 IPR012678  Ribosomal protein L23/L15e core domain superfamily
 IPR013025  Ribosomal protein L25/L23
 IPR019985  Ribosomal protein L23


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IBA
 biological_processGO:0006412 translation IBA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 cellular_componentGO:0031932 TORC2 complex IDA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019843 rRNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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