ENSMUSG00000059070


Mus musculus

Features
Gene ID: ENSMUSG00000059070
  
Biological name :Rpl18
  
Synonyms : P35980 / ribosomal protein L18 / Rpl18
  
Possible biological names infered from orthology : Q07020
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: B3
Gene start: 45715457
Gene end: 45720836
  
Corresponding Affymetrix probe sets: 10487925 (MoGene1.0st)   10539484 (MoGene1.0st)   10542077 (MoGene1.0st)   10553100 (MoGene1.0st)   1436699_x_at (Mouse Genome 430 2.0 Array)   1437005_a_at (Mouse Genome 430 2.0 Array)   1450372_a_at (Mouse Genome 430 2.0 Array)   1456447_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000147257
Ensembl peptide - ENSMUSP00000148055
Ensembl peptide - ENSMUSP00000147918
Ensembl peptide - ENSMUSP00000147862
Ensembl peptide - ENSMUSP00000147816
Ensembl peptide - ENSMUSP00000147770
Ensembl peptide - ENSMUSP00000147725
Ensembl peptide - ENSMUSP00000072320
NCBI entrez gene - 19899     See in Manteia.
MGI - MGI:98003
RefSeq - XM_017322049
RefSeq - NM_009077
RefSeq Peptide - NP_033103
swissprot - A0A1B0GRZ3
swissprot - A0A1B0GQU8
swissprot - A0A1B0GSF7
swissprot - A0A1B0GSS8
swissprot - P35980
swissprot - Q58EW0
swissprot - A0A1B0GS28
swissprot - A0A1B0GSA8
Ensembl - ENSMUSG00000059070
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl18ENSDARG00000029533Danio rerio
 RPL18ENSG00000063177Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000039  Ribosomal protein L18e
 IPR021131  Ribosomal protein L18e/L15P
 IPR021132  Ribosomal protein L18e, conserved site
 IPR036227  Ribosomal L18e/L15P superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation ISS
 biological_processGO:0006412 translation IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005730 nucleolus ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum ISO
 cellular_componentGO:0005791 rough endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit ISS
 cellular_componentGO:0042788 polysomal ribosome ISS
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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