ENSMUSG00000062647


Mus musculus

Features
Gene ID: ENSMUSG00000062647
  
Biological name :Rpl7a
  
Synonyms : P12970 / ribosomal protein L7A / Rpl7a
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: A3
Gene start: 26910764
Gene end: 26913318
  
Corresponding Affymetrix probe sets: 10418498 (MoGene1.0st)   10422057 (MoGene1.0st)   10428169 (MoGene1.0st)   10452384 (MoGene1.0st)   10470305 (MoGene1.0st)   10470316 (MoGene1.0st)   10470318 (MoGene1.0st)   10470320 (MoGene1.0st)   10495989 (MoGene1.0st)   10543464 (MoGene1.0st)   10568532 (MoGene1.0st)   10587546 (MoGene1.0st)   10588026 (MoGene1.0st)   10595441 (MoGene1.0st)   10603172 (MoGene1.0st)   1422613_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000099962
NCBI entrez gene - 27176     See in Manteia.
MGI - MGI:1353472
RefSeq - XM_017318923
RefSeq - NM_013721
RefSeq Peptide - NP_038749
swissprot - P12970
swissprot - Q58ET1
Ensembl - ENSMUSG00000062647
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl7aENSDARG00000019230Danio rerio
 RPL7AENSGALG00000003197Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rpl7a-ps5ENSMUSG0000007105298
Gm14214ENSMUSG0000009864078


Protein motifs (from Interpro)
Interpro ID Name
 IPR001921  Ribosomal protein L7A/L8
 IPR004037  Ribosomal protein L7Ae conserved site
 IPR004038  Ribosomal protein L7Ae/L30e/S12e/Gadd45
 IPR018492  Ribosomal protein L7Ae/L8/Nhp2 family
 IPR029064  50S ribosomal protein L30e-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000470 maturation of LSU-rRNA IBA
 biological_processGO:0006412 translation IBA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0016020 membrane IDA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 cellular_componentGO:0042788 polysomal ribosome IDA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0045296 cadherin binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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