ENSGALG00000003197


Gallus gallus

Features
Gene ID: ENSGALG00000003197
  
Biological name :RPL7A
  
Synonyms : 60S ribosomal protein L7a / P32429 / RPL7A
  
Possible biological names infered from orthology : Gm14214 / P12970 / P62424 / ribosomal protein L7a / Rpl7a-ps5
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 7341076
Gene end: 7344697
  
Corresponding Affymetrix probe sets: Gga.4080.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044657
Ensembl peptide - ENSGALP00000064250
Ensembl peptide - ENSGALP00000061009
Ensembl peptide - ENSGALP00000060869
Ensembl peptide - ENSGALP00000060146
Ensembl peptide - ENSGALP00000058812
Ensembl peptide - ENSGALP00000054880
Ensembl peptide - ENSGALP00000054385
Ensembl peptide - ENSGALP00000038463
NCBI entrez gene - 417158     See in Manteia.
RefSeq - NM_001004379
RefSeq Peptide - NP_001004379
swissprot - A0A1L1RQ08
swissprot - A0A1L1RJ86
swissprot - A0A1D5PPS5
swissprot - A0A1D5PNE4
swissprot - A0A1D5NWB9
swissprot - F2Z4L5
swissprot - A0A1L1RZG6
swissprot - P32429
swissprot - A0A1L1RQD9
Ensembl - ENSGALG00000003197
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl7aENSDARG00000019230Danio rerio
 RPL7AENSG00000148303Homo sapiens
 Gm14214ENSMUSG00000098640Mus musculus
 Rpl7aENSMUSG00000062647Mus musculus
 Rpl7a-ps5ENSMUSG00000071052Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001921  Ribosomal protein L7A/L8
 IPR004037  Ribosomal protein L7Ae conserved site
 IPR004038  Ribosomal protein L7Ae/L30e/S12e/Gadd45
 IPR018492  Ribosomal protein L7Ae/L8/Nhp2 family
 IPR029064  50S ribosomal protein L30e-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000470 maturation of LSU-rRNA IBA
 biological_processGO:0006412 translation IBA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 cellular_componentGO:0042788 polysomal ribosome IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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