ENSMUSG00000063406


Mus musculus

Features
Gene ID: ENSMUSG00000063406
  
Biological name :Tmed5
  
Synonyms : Q9CXE7 / Tmed5 / transmembrane p24 trafficking protein 5
  
Possible biological names infered from orthology : Q9Y3A6
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: F
Gene start: 108106366
Gene end: 108132620
  
Corresponding Affymetrix probe sets: 10532157 (MoGene1.0st)   1424573_at (Mouse Genome 430 2.0 Array)   1424574_at (Mouse Genome 430 2.0 Array)   1431789_s_at (Mouse Genome 430 2.0 Array)   1445343_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000056449
Ensembl peptide - ENSMUSP00000113922
Ensembl peptide - ENSMUSP00000113422
Ensembl peptide - ENSMUSP00000112612
Ensembl peptide - ENSMUSP00000112406
Ensembl peptide - ENSMUSP00000002837
NCBI entrez gene - 73130     See in Manteia.
MGI - MGI:1921586
RefSeq - NM_028876
RefSeq - XM_011249578
RefSeq - XM_006535240
RefSeq - XM_006535238
RefSeq Peptide - NP_083152
RefSeq Peptide - NP_001334312
swissprot - E9Q2J2
swissprot - Q3V440
swissprot - Q8C5H9
swissprot - Q9CXE7
swissprot - A2RS96
swissprot - D3Z615
swissprot - E9PXY3
Ensembl - ENSMUSG00000063406
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmed5ENSDARG00000008765Danio rerio
 TMED5ENSGALG00000005904Gallus gallus
 TMED5ENSG00000117500Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tmed1 / Q3V009 / transmembrane p24 trafficking protein 1 / Q13445*ENSMUSG0000003218052
Tmed3 / Q78IS1 / Transmembrane emp24 domain-containing protein 3 / Q9Y3Q3* / transmembrane p24 trafficking protein 3*ENSMUSG0000003235331
Tmed7 / transmembrane p24 trafficking protein 7 / Q9Y3B3*ENSMUSG0000003318431
Tmed2 / Q9R0Q3 / transmembrane p24 trafficking protein 2 / Q15363*ENSMUSG0000002939024


Protein motifs (from Interpro)
Interpro ID Name
 IPR009038  GOLD domain
 IPR015717  Transmembrane emp24 domain-containing protein 5
 IPR015720  TMP21-related
 IPR036598  GOLD domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0090161 Golgi ribbon formation ISS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment ISS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005801 cis-Golgi network ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane IEA
 cellular_componentGO:0070971 endoplasmic reticulum exit site ISS
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
WNT ligand biogenesis and trafficking


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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