ENSG00000117500


Homo sapiens

Features
Gene ID: ENSG00000117500
  
Biological name :TMED5
  
Synonyms : Q9Y3A6 / TMED5 / transmembrane p24 trafficking protein 5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p22.1
Gene start: 93149742
Gene end: 93180728
  
Corresponding Affymetrix probe sets: 1558813_at (Human Genome U133 Plus 2.0 Array)   1558814_s_at (Human Genome U133 Plus 2.0 Array)   202194_at (Human Genome U133 Plus 2.0 Array)   202195_s_at (Human Genome U133 Plus 2.0 Array)   239283_at (Human Genome U133 Plus 2.0 Array)   242263_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000359305
Ensembl peptide - ENSP00000471060
Ensembl peptide - ENSP00000418992
Ensembl peptide - ENSP00000359303
NCBI entrez gene - 50999     See in Manteia.
OMIM - 616876
RefSeq - NM_001167830
RefSeq - NM_016040
RefSeq Peptide - NP_001161302
RefSeq Peptide - NP_057124
swissprot - Q9Y3A6
swissprot - M0R072
swissprot - B1AKT3
Ensembl - ENSG00000117500
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmed5ENSDARG00000008765Danio rerio
 TMED5ENSGALG00000005904Gallus gallus
 Tmed5ENSMUSG00000063406Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMED1 / Q13445 / transmembrane p24 trafficking protein 1ENSG0000009920354
TMED7 / Q9Y3B3 / transmembrane p24 trafficking protein 7ENSG0000013497030
TMED3 / Q9Y3Q3 / transmembrane p24 trafficking protein 3ENSG0000016655728
TMED7-TICAM2 / TMED7-TICAM2 readthroughENSG0000025120124
TMED2 / Q15363 / transmembrane p24 trafficking protein 2ENSG0000008659824


Protein motifs (from Interpro)
Interpro ID Name
 IPR009038  GOLD domain
 IPR015717  Transmembrane emp24 domain-containing protein 5
 IPR015720  TMP21-related
 IPR036598  GOLD domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0090161 Golgi ribbon formation IMP
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment IDA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005801 cis-Golgi network IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane IEA
 cellular_componentGO:0070971 endoplasmic reticulum exit site IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
WNT ligand biogenesis and trafficking


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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