ENSG00000166557


Homo sapiens

Features
Gene ID: ENSG00000166557
  
Biological name :TMED3
  
Synonyms : Q9Y3Q3 / TMED3 / transmembrane p24 trafficking protein 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: 1
Band: q25.1
Gene start: 79311062
Gene end: 79427432
  
Corresponding Affymetrix probe sets: 208837_at (Human Genome U133 Plus 2.0 Array)   239115_at (Human Genome U133 Plus 2.0 Array)   239613_at (Human Genome U133 Plus 2.0 Array)   242928_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000446062
Ensembl peptide - ENSP00000299705
Ensembl peptide - ENSP00000414983
Ensembl peptide - ENSP00000440228
NCBI entrez gene - 23423     See in Manteia.
RefSeq - XM_017022041
RefSeq - NM_001301203
RefSeq - NM_007364
RefSeq - XM_017022040
RefSeq Peptide - NP_031390
RefSeq Peptide - NP_001288132
RefSeq Peptide - NP_001317305
swissprot - A0A140VKD1
swissprot - F5H4M7
swissprot - G3V1J9
swissprot - Q9Y3Q3
Ensembl - ENSG00000166557
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmed3ENSDARG00000028816Danio rerio
 TMED3ENSGALG00000008272Gallus gallus
 Tmed3ENSMUSG00000032353Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMED7 / Q9Y3B3 / transmembrane p24 trafficking protein 7ENSG0000013497065
TMED7-TICAM2 / TMED7-TICAM2 readthroughENSG0000025120157
TMED1 / Q13445 / transmembrane p24 trafficking protein 1ENSG0000009920331
TMED5 / Q9Y3A6 / transmembrane p24 trafficking protein 5ENSG0000011750030
TMED2 / Q15363 / transmembrane p24 trafficking protein 2ENSG0000008659828


Protein motifs (from Interpro)
Interpro ID Name
 IPR009038  GOLD domain
 IPR015720  TMP21-related
 IPR036598  GOLD domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport TAS
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER TAS
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment IDA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030126 COPI vesicle coat ISS
 cellular_componentGO:0030133 transport vesicle TAS
 cellular_componentGO:0030663 COPI-coated vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0032580 Golgi cisterna membrane IEA
 cellular_componentGO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane IEA


Pathways (from Reactome)
Pathway description
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000166557 TMED3 / Q9Y3Q3 / transmembrane p24 trafficking protein 3  / complex






 

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