ENSDARG00000028816


Danio rerio

Features
Gene ID: ENSDARG00000028816
  
Biological name :tmed3
  
Synonyms : tmed3 / transmembrane p24 trafficking protein 3
  
Possible biological names infered from orthology : Q78IS1 / Q9Y3Q3 / Transmembrane emp24 domain-containing protein 3
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 30175656
Gene end: 30177691
  
Corresponding Affymetrix probe sets: Dr.4767.1.A1_a_at (Zebrafish Array)   Dr.4767.2.A1_at (Zebrafish Array)   Dr.4767.2.A1_x_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000046688
NCBI entrez gene - 336391     See in Manteia.
swissprot - B3DKM3
ZFIN ID - ZDB-GENE-030131-8335
Ensembl - ENSDARG00000028816
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMED3ENSGALG00000008272Gallus gallus
 TMED3ENSG00000166557Homo sapiens
 Tmed3ENSMUSG00000032353Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmed7 / transmembrane p24 trafficking protein 7 / Q9Y3B3* / TMED7-TICAM2* / TMED7-TICAM2 readthrough*ENSDARG0000004602258
tmed1b / transmembrane p24 trafficking protein 1b / TMED1* / Q13445* / transmembrane p24 trafficking protein 1*ENSDARG0000001725532
tmed1a / transmembrane p24 trafficking protein 1a / TMED1* / Q13445* / transmembrane p24 trafficking protein 1*ENSDARG0000003132527
tmed2 / transmembrane p24 trafficking protein 2 / Q15363* / Q9R0Q3*ENSDARG0000002690825
tmed5 / transmembrane p24 trafficking protein 5 / Q9CXE7* / Q9Y3A6*ENSDARG0000000876524


Protein motifs (from Interpro)
Interpro ID Name
 IPR009038  GOLD domain
 IPR015720  TMP21-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000028816 tmed3 / transmembrane p24 trafficking protein 3 / Q78IS1* / Q9Y3Q3* / Transmembrane emp24 domain-containing protein 3 *  / complex






 

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