ENSDARG00000046022


Danio rerio

Features
Gene ID: ENSDARG00000046022
  
Biological name :tmed7
  
Synonyms : tmed7 / transmembrane p24 trafficking protein 7
  
Possible biological names infered from orthology : Q9Y3B3 / TMED7-TICAM2 / TMED7-TICAM2 readthrough
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 1239
Gene end: 9428
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000067665
Ensembl peptide - ENSDARP00000145377
Ensembl peptide - ENSDARP00000148672
Ensembl peptide - ENSDARP00000152056
Ensembl peptide - ENSDARP00000157340
NCBI entrez gene - 405848     See in Manteia.
RefSeq - NM_001313709
RefSeq - NM_001313708
RefSeq - NM_001313710
RefSeq - NM_212912
RefSeq Peptide - NP_001300637
RefSeq Peptide - NP_001300638
RefSeq Peptide - NP_001300639
RefSeq Peptide - NP_998077
swissprot - F1RAM9
ZFIN ID - ZDB-GENE-040426-2570
Ensembl - ENSDARG00000046022
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMED7ENSGALG00000028484Gallus gallus
 TMED7ENSG00000134970Homo sapiens
 TMED7-TICAM2ENSG00000251201Homo sapiens
 Tmed7ENSMUSG00000033184Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmed3 / transmembrane p24 trafficking protein 3 / Q78IS1* / Q9Y3Q3* / Transmembrane emp24 domain-containing protein 3 *ENSDARG0000002881655
tmed1b / transmembrane p24 trafficking protein 1b / TMED1* / Q13445* / transmembrane p24 trafficking protein 1*ENSDARG0000001725529
tmed2 / transmembrane p24 trafficking protein 2 / Q15363* / Q9R0Q3*ENSDARG0000002690829
tmed5 / transmembrane p24 trafficking protein 5 / Q9CXE7* / Q9Y3A6*ENSDARG0000000876527
tmed1a / transmembrane p24 trafficking protein 1a / TMED1* / Q13445* / transmembrane p24 trafficking protein 1*ENSDARG0000003132527


Protein motifs (from Interpro)
Interpro ID Name
 IPR009038  GOLD domain
 IPR015718  Transmembrane emp24 domain-containing protein 7
 IPR015720  TMP21-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000046022 tmed7 / transmembrane p24 trafficking protein 7 / Q9Y3B3* / TMED7-TICAM2* / TMED7-TICAM2 readthrough*  / complex






 

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