ENSDARG00000017255


Danio rerio

Features
Gene ID: ENSDARG00000017255
  
Biological name :tmed1b
  
Synonyms : tmed1b / transmembrane p24 trafficking protein 1b
  
Possible biological names infered from orthology : Q13445 / Q3V009 / TMED1 / transmembrane p24 trafficking protein 1
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 58840889
Gene end: 58850686
  
Corresponding Affymetrix probe sets: Dr.22432.1.A1_at (Zebrafish Array)   NM_001080640_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000089080
NCBI entrez gene - 791158     See in Manteia.
RefSeq - NM_001080640
RefSeq Peptide - NP_001074109
swissprot - F1QF76
ZFIN ID - ZDB-GENE-070112-1112
Ensembl - ENSDARG00000017255
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMED1ENSG00000099203Homo sapiens
 Tmed1ENSMUSG00000032180Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmed1a / transmembrane p24 trafficking protein 1a / TMED1* / Q13445* / transmembrane p24 trafficking protein 1*ENSDARG0000003132562
tmed5 / transmembrane p24 trafficking protein 5 / Q9CXE7* / Q9Y3A6*ENSDARG0000000876548
tmed3 / transmembrane p24 trafficking protein 3 / Q78IS1* / Q9Y3Q3* / Transmembrane emp24 domain-containing protein 3 *ENSDARG0000002881629
tmed7 / transmembrane p24 trafficking protein 7 / Q9Y3B3* / TMED7-TICAM2* / TMED7-TICAM2 readthrough*ENSDARG0000004602228
tmed2 / transmembrane p24 trafficking protein 2 / Q15363* / Q9R0Q3*ENSDARG0000002690822


Protein motifs (from Interpro)
Interpro ID Name
 IPR009038  GOLD domain
 IPR015720  TMP21-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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