ENSMUSG00000064215


Mus musculus

Features
Gene ID: ENSMUSG00000064215
  
Biological name :Ifi27
  
Synonyms : Ifi27
  
Possible biological names infered from orthology : interferon alpha inducible protein 27
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: E
Gene start: 103434211
Gene end: 103440239
  
Corresponding Affymetrix probe sets: 10397975 (MoGene1.0st)   1452956_a_at (Mouse Genome 430 2.0 Array)   1454757_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000082142
Ensembl peptide - ENSMUSP00000078275
Ensembl peptide - ENSMUSP00000117403
Ensembl peptide - ENSMUSP00000068729
Ensembl peptide - ENSMUSP00000075994
Ensembl peptide - ENSMUSP00000076068
NCBI entrez gene - 52668     See in Manteia.
MGI - MGI:1277180
RefSeq - XM_017315132
RefSeq - NM_026790
RefSeq - NM_194066
RefSeq - NM_194067
RefSeq - NM_194068
RefSeq - NM_194069
RefSeq - XM_006516076
RefSeq - XM_006516077
RefSeq Peptide - NP_919042
RefSeq Peptide - NP_919043
RefSeq Peptide - NP_919044
RefSeq Peptide - NP_919045
RefSeq Peptide - NP_081066
swissprot - Q70LM9
swissprot - Q70LN0
swissprot - Q8C6G0
swissprot - Q9D1E1
swissprot - D3Z4L8
swissprot - E9Q1C5
Ensembl - ENSMUSG00000064215
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-188i13.10ENSDARG00000075151Danio rerio
 si:dkey-188i13.11ENSDARG00000092895Danio rerio
 si:dkey-188i13.6ENSDARG00000074217Danio rerio
 si:dkey-188i13.9ENSDARG00000074754Danio rerio
 zgc:152791ENSDARG00000039243Danio rerio
 IFI27L2ENSGALG00000021627Gallus gallus
 IFI27ENSG00000165949Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8VC49 / Ifi27l2b / Interferon alpha-inducible protein 27-like protein 2B ENSMUSG0000002120824
Q8R412 / Ifi27l2a / Interferon alpha-inducible protein 27-like protein 2A ENSMUSG0000007901719


Protein motifs (from Interpro)
Interpro ID Name
 IPR009311  Interferon alpha-inducible protein IFI6/IFI27-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II ISO
 biological_processGO:0046825 regulation of protein export from nucleus ISO
 cellular_componentGO:0005637 nuclear inner membrane ISO
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0001102 RNA polymerase II activating transcription factor binding ISO
 molecular_functionGO:0005521 lamin binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0004883 abnormal blood vessel healing "anomaly in the repair process of blood vessels after injury" [MGI:monikat "Monika Tomczuk, Mouse Genome Informatics Curator"]
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Allelic Composition: Krastm4Tyj/Kras+,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S4/SvJae * C57BL/6 * CBA

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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