ENSDARG00000039243


Danio rerio

Features
Gene ID: ENSDARG00000039243
  
Biological name :zgc:152791
  
Synonyms : zgc:152791
  
Possible biological names infered from orthology : IFI27 / IFI27L1 / IFI27L2 / Ifi27l2a / Ifi27l2b / IFI6 / interferon alpha inducible protein 27 / interferon alpha inducible protein 27 like 1 / interferon alpha inducible protein 27 like 2 / Interferon alpha-inducible protein 27-like protein 2A / Interferon alpha-inducible protein 27-like protein 2B / interferon alpha inducible protein 6 / P09912 / Q8R412 / Q8VC49 / Q96BM0 / Q9H2X8
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 37617518
Gene end: 37620290
  
Corresponding Affymetrix probe sets: Dr.14230.1.S1_at (Zebrafish Array)   NM_001007133_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000147083
Ensembl peptide - ENSDARP00000151423
Ensembl peptide - ENSDARP00000011827
Ensembl peptide - ENSDARP00000122152
NCBI entrez gene - 641326     See in Manteia.
RefSeq - NM_001007133
RefSeq Peptide - NP_001007134
RefSeq Peptide - NP_001278863
swissprot - B8A493
ZFIN ID - ZDB-GENE-060901-4
Ensembl - ENSDARG00000039243
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IFI27L2ENSGALG00000021627Gallus gallus
 IFI27ENSG00000165949Homo sapiens
 IFI6ENSG00000126709Homo sapiens
 Q96BM0ENSG00000165948Homo sapiens
 Q9H2X8ENSG00000119632Homo sapiens
 Ifi27ENSMUSG00000064215Mus musculus
 Q8R412ENSMUSG00000079017Mus musculus
 Q8VC49ENSMUSG00000021208Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-188i13.6 / IFI6* / IFI27* / Q8R412* / Q96BM0* / Q8VC49* / Q9H2X8* / P09912* / IFI27L1* / IFI27L2* / Ifi27l2b* / Ifi27l2a* / interferon alpha inducible protein 6* / interferon alpha ...ENSDARG0000007421765
si:dkey-188i13.9 / IFI6* / IFI27* / Q8R412* / Q96BM0* / Q8VC49* / Q9H2X8* / P09912* / IFI27L1* / IFI27L2* / Ifi27l2b* / Ifi27l2a* / interferon alpha inducible protein 6* / interferon alpha ...ENSDARG0000007475454
si:dkey-188i13.10 / IFI6* / IFI27* / Q8R412* / Q96BM0* / Q8VC49* / Q9H2X8* / P09912* / IFI27L1* / IFI27L2* / Ifi27l2b* / Ifi27l2a* / interferon alpha inducible protein 6* / interferon alpha...ENSDARG0000007515152
si:dkey-188i13.11 / IFI6* / IFI27* / Q8R412* / Q96BM0* / Q8VC49* / Q9H2X8* / P09912* / IFI27L1* / IFI27L2* / Ifi27l2b* / Ifi27l2a* / interferon alpha inducible protein 6* / interferon alpha...ENSDARG0000009289551


Protein motifs (from Interpro)
Interpro ID Name
 IPR009311  Interferon alpha-inducible protein IFI6/IFI27-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr