ENSMUSG00000079017


Mus musculus

Features
Gene ID: ENSMUSG00000079017
  
Biological name :Ifi27l2a
  
Synonyms : Ifi27l2a / Interferon alpha-inducible protein 27-like protein 2A / Q8R412
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: E
Gene start: 103442167
Gene end: 103443680
  
Corresponding Affymetrix probe sets: 10402347 (MoGene1.0st)   1426278_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000054698
NCBI entrez gene - 76933     See in Manteia.
MGI - MGI:1924183
RefSeq - NM_029803
RefSeq Peptide - NP_084079
swissprot - Q8R412
Ensembl - ENSMUSG00000079017
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-188i13.10ENSDARG00000075151Danio rerio
 si:dkey-188i13.11ENSDARG00000092895Danio rerio
 si:dkey-188i13.6ENSDARG00000074217Danio rerio
 si:dkey-188i13.9ENSDARG00000074754Danio rerio
 zgc:152791ENSDARG00000039243Danio rerio
 IFI27L2ENSGALG00000021627Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8VC49 / Ifi27l2b / Interferon alpha-inducible protein 27-like protein 2B ENSMUSG0000002120879
Ifi27 / interferon alpha inducible protein 27*ENSMUSG0000006421556


Protein motifs (from Interpro)
Interpro ID Name
 IPR009311  Interferon alpha-inducible protein IFI6/IFI27-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007568 aging IDA
 biological_processGO:0009615 response to virus IDA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0010897 abnormal bronchiole epithelium morphology "any structural anomaly of the epithelial layer of the bronchioles" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Mecp2tm1Bird/Y,Ssttm2.1(cre)Zjh/Sst+
Genetic Background: involves: 129P2/OlaHsd * 129S4/SvJae * 129S6/SvEvTac * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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