ENSMUSG00000069867


Mus musculus

Features
Gene ID: ENSMUSG00000069867
  
Biological name :Pabpn1l
  
Synonyms : Pabpn1l / poly(A)binding protein nuclear 1-like / Q5XFR0
  
Possible biological names infered from orthology : A6NDY0 / poly(A) binding protein nuclear 1 like, cytoplasmic
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: E1
Gene start: 122619471
Gene end: 122622739
  
Corresponding Affymetrix probe sets: 10582419 (MoGene1.0st)   1439991_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000148736
Ensembl peptide - ENSMUSP00000090747
NCBI entrez gene - 382035     See in Manteia.
MGI - MGI:2685954
RefSeq - NM_001007462
RefSeq Peptide - NP_001007463
swissprot - B7ZP52
swissprot - Q5XFR0
Ensembl - ENSMUSG00000069867
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pabpn1lENSDARG00000087996Danio rerio
 PABPN1LENSGALG00000006242Gallus gallus
 A6NDY0ENSG00000205022Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm20521 / BCL2L2-PABPN1 readthrough / Q92843* / BCL2L2-PABPN1*ENSMUSG0000009223236
Pabpn1 / Q8CCS6 / poly(A) binding protein, nuclear 1 / Q86U42*ENSMUSG0000002219435


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005737 cytoplasm ISS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008143 poly(A) binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001926 female infertility "inability of female to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:34193]
Show

Allelic Composition: Nampttm1.1(KOMP)Vlcg/Nampttm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Nampttm1.1(KOMP)Vlcg/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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