ENSMUSG00000070564


Mus musculus

Features
Gene ID: ENSMUSG00000070564
  
Biological name :Ntn5
  
Synonyms : Netrin-5 / Ntn5 / Q3UQ22
  
Possible biological names infered from orthology : Q8WTR8
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: B3
Gene start: 45684022
Gene end: 45694556
  
Corresponding Affymetrix probe sets: 10553071 (MoGene1.0st)   1446220_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000103371
Ensembl peptide - ENSMUSP00000138144
Ensembl peptide - ENSMUSP00000138412
NCBI entrez gene - 243967     See in Manteia.
MGI - MGI:2685330
RefSeq - XM_006540893
RefSeq - NM_001033356
RefSeq - NM_001289692
RefSeq - NM_001289693
RefSeq - XM_006540886
RefSeq - XM_006540887
RefSeq - XM_006540888
RefSeq - XM_006540889
RefSeq - XM_006540890
RefSeq - XM_006540892
RefSeq - XM_006540885
RefSeq Peptide - NP_001276621
RefSeq Peptide - NP_001276622
RefSeq Peptide - NP_001028528
swissprot - Q3UQ22
swissprot - S4R1A5
swissprot - S4R1X6
Ensembl - ENSMUSG00000070564
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ntn5ENSDARG00000036422Danio rerio
 NTN5ENSG00000142233Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q3UUG6 / Q9R1A3 / Tbc1d24 / Netrin-3 / NTN3* / O00634*ENSMUSG0000003647336
Ntn1 / O09118 / Netrin-1 / O95631*ENSMUSG0000002090234
Ush2a / Q2QI47 / usherin / O75445*ENSMUSG0000002660923
Ntng2 / Q8R4F1 / Netrin-G2 / Q96CW9*ENSMUSG0000003551319
Ntng1 / Q8R4G0 / Netrin-G1 / Q9Y2I2*ENSMUSG0000005985717
Megf9 / Q8BH27 / Multiple epidermal growth factor-like domains protein 9 / Q9H1U4* / multiple EGF like domains 9*ENSMUSG0000003927011


Protein motifs (from Interpro)
Interpro ID Name
 IPR001134  Netrin domain
 IPR002049  Laminin EGF domain
 IPR008979  Galactose-binding-like domain superfamily
 IPR008993  Tissue inhibitor of metalloproteinases-like, OB-fold
 IPR018933  Netrin module, non-TIMP type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011723 ectopic neuron "appearance of a neuron or group of neurons in a region where it is not normally found" [MGI:csmith]
Show

Allelic Composition: Gt(ROSA)26Sortm2.1(CAG-EGFP,-DTA*G128D)Pjen/Gt(ROSA)26Sortm2.1(CAG-EGFP,-DTA*G128D)Pjen
Genetic Background: B6.Cg-Gt(ROSA)26Sortm2.1(CAG-EGFP,-DTA*G128D)Pjen/J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr