ENSMUSG00000036473


Mus musculus

Features
Gene ID: ENSMUSG00000036473
  
Biological name :Tbc1d24
  
Synonyms : Netrin-3 / Q3UUG6 / Q9R1A3 / Tbc1d24
  
Possible biological names infered from orthology : NTN3 / O00634
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: A3.3
Gene start: 24175431
Gene end: 24209387
  
Corresponding Affymetrix probe sets: 10448459 (MoGene1.0st)   10448483 (MoGene1.0st)   1422056_at (Mouse Genome 430 2.0 Array)   1438424_at (Mouse Genome 430 2.0 Array)   1442325_at (Mouse Genome 430 2.0 Array)   1448028_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000144575
Ensembl peptide - ENSMUSP00000144097
Ensembl peptide - ENSMUSP00000144208
Ensembl peptide - ENSMUSP00000144250
Ensembl peptide - ENSMUSP00000024931
Ensembl peptide - ENSMUSP00000036458
Ensembl peptide - ENSMUSP00000094989
Ensembl peptide - ENSMUSP00000126107
Ensembl peptide - ENSMUSP00000127005
Ensembl peptide - ENSMUSP00000128001
Ensembl peptide - ENSMUSP00000128868
Ensembl peptide - ENSMUSP00000143883
Ensembl peptide - ENSMUSP00000143949
Ensembl peptide - ENSMUSP00000144026
NCBI entrez gene - 224617     See in Manteia.
NCBI entrez gene - 18209     See in Manteia.
MGI - MGI:2443456
RefSeq - NM_001163849
RefSeq - NM_001163847
RefSeq - NM_001163848
RefSeq - NM_001163850
RefSeq - NM_001163851
RefSeq - NM_001163852
RefSeq - NM_001163853
RefSeq - NM_010947
RefSeq - NM_173186
RefSeq Peptide - NP_035077
RefSeq Peptide - NP_775278
RefSeq Peptide - NP_001157320
RefSeq Peptide - NP_001157321
RefSeq Peptide - NP_001157322
RefSeq Peptide - NP_001157323
RefSeq Peptide - NP_001157324
RefSeq Peptide - NP_001157325
RefSeq Peptide - NP_001157319
swissprot - Q8BRB6
swissprot - A0A0J9YUB2
swissprot - Q3UUG6
swissprot - Q52KG2
swissprot - Q9R1A3
Ensembl - ENSMUSG00000036473
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ntn2ENSDARG00000076748Danio rerio
 NTN3ENSGALG00000029072Gallus gallus
 NTN3ENSG00000162068Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ntn1 / O09118 / Netrin-1 / O95631*ENSMUSG0000002090253
Ntn5 / Q3UQ22 / Netrin-5 / Q8WTR8*ENSMUSG0000007056428
Ush2a / Q2QI47 / usherin / O75445*ENSMUSG0000002660926
Ntng2 / Q8R4F1 / Netrin-G2 / Q96CW9*ENSMUSG0000003551325
Ntng1 / Q8R4G0 / Netrin-G1 / Q9Y2I2*ENSMUSG0000005985724
Megf9 / Q8BH27 / Multiple epidermal growth factor-like domains protein 9 / Q9H1U4* / multiple EGF like domains 9*ENSMUSG0000003927014


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR001134  Netrin domain
 IPR002049  Laminin EGF domain
 IPR006571  TLDc domain
 IPR008211  Laminin, N-terminal
 IPR008979  Galactose-binding-like domain superfamily
 IPR008993  Tissue inhibitor of metalloproteinases-like, OB-fold
 IPR018933  Netrin module, non-TIMP type
 IPR035969  Rab-GTPase-TBC domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated ISA
 biological_processGO:0007409 axonogenesis TAS
 biological_processGO:0007520 myoblast fusion ISA
 biological_processGO:0031175 neuron projection development ISO
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:1902083 negative regulation of peptidyl-cysteine S-nitrosylation IDA
 biological_processGO:1903204 negative regulation of oxidative stress-induced neuron death IDA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0030054 cell junction ISO
 cellular_componentGO:0031594 neuromuscular junction ISS
 cellular_componentGO:0043195 terminal bouton ISS
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0005102 signaling receptor binding IPI
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000033022 Cdo1 / P60334 / Cysteine dioxygenase type 1 / Q16878*  / complex / reaction






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr