ENSMUSG00000079033


Mus musculus

Features
Gene ID: ENSMUSG00000079033
  
Biological name :Mef2b
  
Synonyms : Mef2b / myocyte enhancer factor 2B
  
Possible biological names infered from orthology : Q02080
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: B3.3
Gene start: 70139711
Gene end: 70167488
  
Corresponding Affymetrix probe sets: 10572301 (MoGene1.0st)   1421541_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000105768
Ensembl peptide - ENSMUSP00000105770
Ensembl peptide - ENSMUSP00000132314
Ensembl peptide - ENSMUSP00000105773
Ensembl peptide - ENSMUSP00000105767
NCBI entrez gene - 105980076     See in Manteia.
NCBI entrez gene - 17259     See in Manteia.
MGI - MGI:104526
RefSeq - NM_001310055
RefSeq - NM_001045484
RefSeq Peptide - NP_001038949
RefSeq Peptide - NP_001296984
swissprot - Q80VR4
swissprot - D3Z372
swissprot - K7N7F1
swissprot - E9Q2M6
Ensembl - ENSMUSG00000079033
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mef2bENSDARG00000093170Danio rerio
 ENSGALG00000037558Gallus gallus
 MEF2BENSG00000213999Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Mef2c / Q8CFN5 / Mus musculus myocyte enhancer factor 2C (Mef2c), transcript variant 14, mRNA. / Q06413* / myocyte enhancer factor 2C*ENSMUSG0000000558340
Mef2d / Q63943 / Myocyte-specific enhancer factor 2D / Q14814* / myocyte enhancer factor 2D*ENSMUSG0000000141939
Mef2a / Q60929 / Mus musculus myocyte enhancer factor 2A (Mef2a), transcript variant 7, mRNA. / Q02078* / myocyte enhancer factor 2A*ENSMUSG0000003055738


Protein motifs (from Interpro)
Interpro ID Name
 IPR002100  Transcription factor, MADS-box
 IPR033896  MADS MEF2-like
 IPR036879  Transcription factor, MADS-box superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0042826 histone deacetylase binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
CDO in myogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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