ENSDARG00000093170


Danio rerio

Features
Gene ID: ENSDARG00000093170
  
Biological name :mef2b
  
Synonyms : mef2b / myocyte enhancer factor 2b
  
Possible biological names infered from orthology : BORCS8-MEF2B / BORCS8-MEF2B readthrough / Q02080
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 18187857
Gene end: 18216488
  
Corresponding Affymetrix probe sets: Dr.22618.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000137657
Ensembl peptide - ENSDARP00000120118
NCBI entrez gene - 558073     See in Manteia.
swissprot - F6NLS4
swissprot - J7HE56
swissprot - A0A0R4ISF3
ZFIN ID - ZDB-GENE-050208-357
Ensembl - ENSDARG00000093170
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000037558Gallus gallus
 BORCS8-MEF2BENSG00000064489Homo sapiens
 MEF2BENSG00000213999Homo sapiens
 Mef2bENSMUSG00000079033Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mef2aa / myocyte enhancer factor 2aa / MEF2A* / Q60929* / Q02078* / myocyte enhancer factor 2A* / Mus musculus myocyte enhancer factor 2A (Mef2a), transcript variant 7, mRNA.*ENSDARG0000003175635
mef2ca / myocyte enhancer factor 2caENSDARG0000002976435
mef2cb / myocyte enhancer factor 2cb / MEF2C* / Q8CFN5* / Q06413* / myocyte enhancer factor 2C* / Mus musculus myocyte enhancer factor 2C (Mef2c), transcript variant 14, mRNA.*ENSDARG0000000941835
mef2d / myocyte enhancer factor 2d / Q14814* / Q63943* / Myocyte-specific enhancer factor 2D *ENSDARG0000004023734
mef2ab / myocyte enhancer factor 2abENSDARG0000005752725


Protein motifs (from Interpro)
Interpro ID Name
 IPR002100  Transcription factor, MADS-box
 IPR033896  MADS MEF2-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
CDO in myogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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