Manteia

ENSMUSG00000092019

Mus musculus

Features

Gene ID:	ENSMUSG00000092019

Biological name :	Gm4027

Synonyms :	Gm4027

Possible biological names infered from orthology :	EIF1AX / eukaryotic translation initiation factor 1A, X-linked / P47813

Species:	Mus musculus

Chr. number:	12
Strand:	1
Band:	D2
Gene start:	87618869
Gene end:	87622955

Corresponding Affymetrix probe sets:	10397541 (MoGene1.0st) 10397543 (MoGene1.0st) 10397551 (MoGene1.0st) 10401822 (MoGene1.0st) 10401829 (MoGene1.0st) 1427479_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000132993 NCBI entrez gene - 100042776 See in Manteia. MGI - MGI:3782201 RefSeq - NM_001177564 RefSeq - XM_011243969 RefSeq Peptide - NP_001171035 swissprot - Q3UT53 Ensembl - ENSMUSG00000092019

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
eif1axa	ENSDARG00000029003	Danio rerio
eif1axb	ENSDARG00000057912	Danio rerio
EIF1AY	ENSGALG00000016410	Gallus gallus
EIF1AX	ENSG00000173674	Homo sapiens

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
BB287469 / expressed sequence BB287469 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000079031	100
Gm5662 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000079029	97
Gm2075 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000096049	97
Gm2022 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000113971	97
Gm2016 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000072905	96
Gm6803 / predicted 6803 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000096803	96
Gm2056 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000095717	94
Gm8332 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000095799	94
Gm8300 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000079034	94
Gm2035 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000096619	94
Gm5039 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000093847	94
Gm5788 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000113805	93
Gm21319 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000095724	92
Gm16368 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000114075	92
Eif1a / Q60872 / Eukaryotic translation initiation factor 1A / P47813* / EIF1AX* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000057561	92
Gm21936 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000113201	92
Eif1ax / Q8BMJ3 / Eukaryotic translation initiation factor 1A, X-chromosomal / P47813* / eukaryotic translation initiation factor 1A, X-linked*	ENSMUSG00000067194	90

Protein motifs (from Interpro)

Interpro ID	Name
IPR001253	Translation initiation factor 1A (eIF-1A)
IPR006196	RNA-binding domain, S1, IF1 type
IPR012340	Nucleic acid-binding, OB-fold
IPR018104	Translation initiation factor 1A (eIF-1A), conserved site

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006412	translation	IEA
biological_process	GO:0006413	translational initiation	IEA
biological_process	GO:0008150	biological_process	ND
cellular_component	GO:0005575	cellular_component	ND
molecular_function	GO:0003674	molecular_function	ND
molecular_function	GO:0003723	RNA binding	IEA
molecular_function	GO:0003743	translation initiation factor activity	IEA

Pathways (from Reactome)

Pathway description

Formation of the ternary complex, and subsequently, the 43S complex

Ribosomal scanning and start codon recognition

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

1 s.

External programs and data are copyrighted by and are the property of their respective authors. The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation
		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr