ENSMUSG00000102049


Mus musculus

Features
Gene ID: ENSMUSG00000102049
  
Biological name :Zbed6
  
Synonyms : D2EAC2 / Zbed6 / zinc finger, BED type containing 6
  
Possible biological names infered from orthology : P86452
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: E4
Gene start: 133655879
Gene end: 133660885
  
Corresponding Affymetrix probe sets: 1441112_at (Mouse Genome 430 2.0 Array)   1455998_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000140892
NCBI entrez gene - 667118     See in Manteia.
MGI - MGI:3828086
RefSeq - NM_001166552
RefSeq Peptide - NP_001160024
swissprot - G0LE24
swissprot - D2EAC2
Ensembl - ENSMUSG00000102049
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZBED6ENSG00000257315Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
D2EAC2 / Gm38394 / predicted gene, 38394 / ZBED6* / P86452* / zinc finger BED-type containing 6*ENSMUSG00000094410100
Zbed4 / Q80WQ9 / zinc finger, BED type containing 4 / O75132*ENSMUSG0000003433321


Protein motifs (from Interpro)
Interpro ID Name
 IPR003656  Zinc finger, BED-type
 IPR008906  HAT, C-terminal dimerisation domain
 IPR012337  Ribonuclease H-like superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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