ENSG00000257315


Homo sapiens

Features
Gene ID: ENSG00000257315
  
Biological name :ZBED6
  
Synonyms : P86452 / ZBED6 / zinc finger BED-type containing 6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q32.1
Gene start: 203795714
Gene end: 203854999
  
Corresponding Affymetrix probe sets: 1565866_a_at (Human Genome U133 Plus 2.0 Array)   1565867_a_at (Human Genome U133 Plus 2.0 Array)   205787_x_at (Human Genome U133 Plus 2.0 Array)   205788_s_at (Human Genome U133 Plus 2.0 Array)   243648_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000438527
Ensembl peptide - ENSP00000447879
NCBI entrez gene - 100381270     See in Manteia.
NCBI entrez gene - 9877     See in Manteia.
OMIM - 613512
RefSeq - XM_017002965
RefSeq - NM_001174108
RefSeq Peptide - NP_001337190
RefSeq Peptide - NP_001337191
RefSeq Peptide - NP_001337192
RefSeq Peptide - NP_001337193
RefSeq Peptide - NP_001167579
swissprot - P86452
Ensembl - ENSG00000257315
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 D2EAC2ENSMUSG00000094410Mus musculus
 Zbed6ENSMUSG00000102049Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZBED4 / O75132 / zinc finger BED-type containing 4ENSG0000010042621
ZBED1 / O96006 / zinc finger BED-type containing 1ENSG0000021471712


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR003656  Zinc finger, BED-type
 IPR008906  HAT, C-terminal dimerisation domain
 IPR012337  Ribonuclease H-like superfamily
 IPR036236  Zinc finger C2H2 superfamily
 IPR036855  Zinc finger, CCCH-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated ISS
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005730 nucleolus ISS
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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