ENSG00000100426


Homo sapiens

Features
Gene ID: ENSG00000100426
  
Biological name :ZBED4
  
Synonyms : O75132 / ZBED4 / zinc finger BED-type containing 4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: 1
Band: q13.33
Gene start: 49853842
Gene end: 49890078
  
Corresponding Affymetrix probe sets: 204799_at (Human Genome U133 Plus 2.0 Array)   214747_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000216268
NCBI entrez gene - 9889     See in Manteia.
OMIM - 612552
RefSeq - NM_014838
RefSeq Peptide - NP_055653
swissprot - O75132
Ensembl - ENSG00000100426
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zbed4ENSDARG00000024306Danio rerio
 ZBED4ENSGALG00000032659Gallus gallus
 Zbed4ENSMUSG00000034333Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZBED6 / P86452 / zinc finger BED-type containing 6ENSG0000025731518
ZBED1 / O96006 / zinc finger BED-type containing 1ENSG0000021471712


Protein motifs (from Interpro)
Interpro ID Name
 IPR003656  Zinc finger, BED-type
 IPR008906  HAT, C-terminal dimerisation domain
 IPR012337  Ribonuclease H-like superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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