ENSDARG00000002564


Danio rerio

Features
Gene ID: ENSDARG00000002564
  
Biological name :syngr1a
  
Synonyms : synaptogyrin 1a / syngr1a
  
Possible biological names infered from orthology : O43759 / O55100 / synaptogyrin 1 / SYNGR1
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 21251627
Gene end: 21280373
  
Corresponding Affymetrix probe sets: Dr.15842.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000005611
NCBI entrez gene - 450047     See in Manteia.
RefSeq - NM_001006067
RefSeq Peptide - NP_001006067
swissprot - Q5XJP3
ZFIN ID - ZDB-GENE-041010-169
Ensembl - ENSDARG00000002564
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYNGR1ENSGALG00000027665Gallus gallus
 O43759ENSG00000100321Homo sapiens
 O55100ENSMUSG00000022415Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
syngr3a / synaptogyrin 3a / O43761* / Q8R191* / SYNGR3* / synaptogyrin 3*ENSDARG0000001487155
syngr3b / synaptogyrin 3b / O43761* / Q8R191* / SYNGR3* / synaptogyrin 3*ENSDARG0000002503448
syngr2b / synaptogyrin 2b / O43760* / O55101* / SYNGR2* / synaptogyrin 2*ENSDARG0000010447040


Protein motifs (from Interpro)
Interpro ID Name
 IPR008253  Marvel domain
 IPR016579  Synaptogyrin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IBA
 cellular_componentGO:0031594 neuromuscular junction IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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