ENSDARG00000025034


Danio rerio

Features
Gene ID: ENSDARG00000025034
  
Biological name :syngr3b
  
Synonyms : synaptogyrin 3b / syngr3b
  
Possible biological names infered from orthology : O43761 / Q8R191 / synaptogyrin 3 / SYNGR3
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 8415983
Gene end: 8428761
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000107652
Ensembl peptide - ENSDARP00000121199
NCBI entrez gene - 570094     See in Manteia.
RefSeq - NM_001320491
RefSeq Peptide - NP_001307420
swissprot - E9QDH8
swissprot - A7E288
ZFIN ID - ZDB-GENE-070822-6
Ensembl - ENSDARG00000025034
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYNGR3ENSGALG00000005589Gallus gallus
 O43761ENSG00000127561Homo sapiens
 Q8R191ENSMUSG00000007021Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
syngr3a / synaptogyrin 3a / O43761* / Q8R191* / SYNGR3* / synaptogyrin 3*ENSDARG0000001487165
syngr1a / synaptogyrin 1a / O43759* / O55100* / SYNGR1* / synaptogyrin 1*ENSDARG0000000256446
syngr2b / synaptogyrin 2b / O43760* / O55101* / SYNGR2* / synaptogyrin 2*ENSDARG0000010447043


Protein motifs (from Interpro)
Interpro ID Name
 IPR008253  Marvel domain
 IPR016579  Synaptogyrin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IBA
 cellular_componentGO:0031594 neuromuscular junction IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr