ENSDARG00000104470


Danio rerio

Features
Gene ID: ENSDARG00000104470
  
Biological name :syngr2b
  
Synonyms : synaptogyrin 2b / syngr2b
  
Possible biological names infered from orthology : O43760 / O55101 / synaptogyrin 2 / SYNGR2
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 45159353
Gene end: 45171208
  
Corresponding Affymetrix probe sets: Dr.19706.1.S1_at (Zebrafish Array)   Dr.24743.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000133276
Ensembl peptide - ENSDARP00000140737
Ensembl peptide - ENSDARP00000138341
NCBI entrez gene - 568509     See in Manteia.
swissprot - A0A0R4IUH5
swissprot - A0A0R4IRJ0
swissprot - A0A0R4IIJ5
ZFIN ID - ZDB-GENE-070424-19
Ensembl - ENSDARG00000104470
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYNGR2ENSGALG00000027902Gallus gallus
 O43760ENSG00000108639Homo sapiens
 O55101ENSMUSG00000048277Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
syngr3a / synaptogyrin 3a / O43761* / Q8R191* / SYNGR3* / synaptogyrin 3*ENSDARG0000001487144
syngr3b / synaptogyrin 3b / O43761* / Q8R191* / SYNGR3* / synaptogyrin 3*ENSDARG0000002503443
syngr1a / synaptogyrin 1a / O43759* / O55100* / SYNGR1* / synaptogyrin 1*ENSDARG0000000256438


Protein motifs (from Interpro)
Interpro ID Name
 IPR008253  Marvel domain
 IPR016579  Synaptogyrin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr