ENSDARG00000005186


Danio rerio

Features
Gene ID: ENSDARG00000005186
  
Biological name :sp4
  
Synonyms : sp4 / sp4 transcription factor
  
Possible biological names infered from orthology : Q02446
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 2364552
Gene end: 2563324
  
Corresponding Affymetrix probe sets: Dr.26469.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000088299
Ensembl peptide - ENSDARP00000124780
Ensembl peptide - ENSDARP00000150009
swissprot - F1QVQ1
swissprot - F8W2C3
ZFIN ID - ZDB-GENE-031202-3
Ensembl - ENSDARG00000005186
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SP4ENSGALG00000039454Gallus gallus
 SP4ENSG00000105866Homo sapiens
 Sp4ENSMUSG00000025323Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sp3a / sp3a transcription factor / SP3* / Q02447* / O70494* / Sp3 transcription factor* / Transcription factor Sp3 *ENSDARG0000000154930
sp1 / sp1 transcription factor / O89090* / P08047* / Transcription factor Sp1 *ENSDARG0000008834730
sp3b / Sp3b transcription factor / SP3* / Q02447* / O70494* / Sp3 transcription factor* / Transcription factor Sp3 *ENSDARG0000000781227
sp2 / sp2 transcription factor / Q02086*ENSDARG0000007676327
sp8a / sp8 transcription factor a / SP8* / Q8IXZ3* / Q8BMJ8* / Sp8 transcription factor* / Transcription factor Sp8 *ENSDARG0000001187020
sp8b / Q6P0J3 / sp8 transcription factor bENSDARG0000005666620
sp9 / Q6NW96 / sp9 transcription factor / Q64HY3* / P0CG40* / Transcription factor Sp9 *ENSDARG0000009937420
sp7 / Sp7 transcription factor / Q8TDD2* / Q8VI67* / Mus musculus Sp7 transcription factor 7 (Sp7), transcript variant 2, mRNA.*ENSDARG0000001951618
sp5a / Sp5 transcription factor a / SP5* / Q9JHX2* / Q6BEB4* / Sp5 transcription factor* / Transcription factor Sp5 *ENSDARG0000007657118
FO704755.1ENSDARG0000000584617
sp5l / Sp5 transcription factor-like / SP5* / Q6BEB4* / Sp5 transcription factor*ENSDARG0000011586816
klf11b / Kruppel-like factor 11b / KLF11* / Q8K1S5* / O14901* / Kruppel like factor 11* / Krueppel-like factor 11 *ENSDARG0000001379414
klf11a / Kruppel-like factor 11a / KLF11* / Q8K1S5* / O14901* / Kruppel like factor 11* / Krueppel-like factor 11 *ENSDARG0000003084413
sp6 / Sp6 transcription factor / Q3SY56* / Q9ESX2* / trans-acting transcription factor 6*ENSDARG0000009988011
klf13 / Kruppel-like factor 13 / Q9JJZ6* / Q9Y2Y9* / Krueppel-like factor 13 *ENSDARG0000006136810
zgc:153115ENSDARG0000006934210
klf9 / Kruppel-like factor 9 / Q13886*ENSDARG000000681949


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR030453  Transcription factor Sp4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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