ENSDARG00000005210


Danio rerio

Features
Gene ID: ENSDARG00000005210
  
Biological name :coro2a
  
Synonyms : coro2a / coronin, actin binding protein, 2A
  
Possible biological names infered from orthology : coronin 2A / Q8C0P5 / Q92828
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 26605065
Gene end: 26654311
  
Corresponding Affymetrix probe sets: Dr.3099.1.A1_at (Zebrafish Array)   NM_199643_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000014182
Ensembl peptide - ENSDARP00000126993
Ensembl peptide - ENSDARP00000137370
Ensembl peptide - ENSDARP00000144803
NCBI entrez gene - 323538     See in Manteia.
RefSeq - NM_199643
RefSeq - XM_005159876
RefSeq - XM_005159877
RefSeq Peptide - NP_955937
swissprot - F1QR96
swissprot - A0A0R4IRX7
swissprot - R4GET0
ZFIN ID - ZDB-GENE-030131-2258
Ensembl - ENSDARG00000005210
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CORO2AENSGALG00000001933Gallus gallus
 CORO2AENSG00000106789Homo sapiens
 Coro2aENSMUSG00000028337Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
coro2ba / coronin, actin binding protein, 2Ba / CORO2B* / Q8BH44* / Q9UQ03* / coronin 2B*ENSDARG0000007944055
coro2bb / coronin, actin binding protein, 2BbENSDARG0000006360452
si:ch73-106g13.1 / CORO2A* / Q8C0P5* / Q92828* / coronin 2A*ENSDARG0000009596950
coro1b / coronin, actin binding protein, 1B / Q9BR76* / Q9WUM3* / coronin 1B*ENSDARG0000000866039
coro1cb / coronin, actin binding protein, 1Cb / CORO1C* / Q9ULV4* / Q9WUM4* / coronin 1C*ENSDARG0000002119338
coro1ca / coronin, actin binding protein, 1Ca / CORO1C* / Q9ULV4* / Q9WUM4* / coronin 1C*ENSDARG0000003559838
coro1a / coronin, actin binding protein, 1A / O89053* / P31146* / coronin 1A*ENSDARG0000005461038
coro6 / coronin 6 / Q6QEF8* / Q920M5*ENSDARG0000010227234
coro7 / coronin 7 / P57737* / Q9D2V7* / CORO7-PAM16* / CORO7-PAM16 readthrough*ENSDARG0000008961626


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015048  Domain of unknown function DUF1899
 IPR015505  Coronin
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain
 IPR027335  Coronin 2A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030036 actin cytoskeleton organization IBA
 cellular_componentGO:0015629 actin cytoskeleton IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0017053 transcriptional repressor complex IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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