ENSDARG00000008660


Danio rerio

Features
Gene ID: ENSDARG00000008660
  
Biological name :coro1b
  
Synonyms : coro1b / coronin, actin binding protein, 1B
  
Possible biological names infered from orthology : coronin 1B / Q9BR76 / Q9WUM3
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 18617982
Gene end: 18656069
  
Corresponding Affymetrix probe sets: Dr.2568.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000007696
NCBI entrez gene - 560168     See in Manteia.
RefSeq - NM_001109707
RefSeq Peptide - NP_001103177
swissprot - F1Q728
ZFIN ID - ZDB-GENE-040123-3
Ensembl - ENSDARG00000008660
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CORO1BENSG00000172725Homo sapiens
 Coro1bENSMUSG00000024835Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
coro1cb / coronin, actin binding protein, 1Cb / CORO1C* / Q9ULV4* / Q9WUM4* / coronin 1C*ENSDARG0000002119358
coro1ca / coronin, actin binding protein, 1Ca / CORO1C* / Q9ULV4* / Q9WUM4* / coronin 1C*ENSDARG0000003559857
coro1a / coronin, actin binding protein, 1A / O89053* / P31146* / coronin 1A*ENSDARG0000005461055
coro6 / coronin 6 / Q6QEF8* / Q920M5*ENSDARG0000010227253
coro2a / coronin, actin binding protein, 2A / Q8C0P5* / Q92828* / coronin 2A*ENSDARG0000000521042
coro2bb / coronin, actin binding protein, 2BbENSDARG0000006360441
coro2ba / coronin, actin binding protein, 2Ba / CORO2B* / Q8BH44* / Q9UQ03* / coronin 2B*ENSDARG0000007944041
si:ch73-106g13.1 / CORO2A* / Q8C0P5* / Q92828* / coronin 2A*ENSDARG0000009596936
coro7 / coronin 7 / P57737* / Q9D2V7* / CORO7-PAM16* / CORO7-PAM16 readthrough*ENSDARG0000008961629


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015048  Domain of unknown function DUF1899
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030036 actin cytoskeleton organization IBA
 cellular_componentGO:0015629 actin cytoskeleton IBA
 molecular_functionGO:0051015 actin filament binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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