ENSDARG00000006125


Danio rerio

Features
Gene ID: ENSDARG00000006125
  
Biological name :csnk1db
  
Synonyms : casein kinase 1, delta b / csnk1db / Q6P3K7
  
Possible biological names infered from orthology : casein kinase 1 delta / CSNK1D / P48730 / Q9DC28
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 33320504
Gene end: 33336787
  
Corresponding Affymetrix probe sets: Dr.3615.1.A1_at (Zebrafish Array)   NM_213250_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000014900
Ensembl peptide - ENSDARP00000153828
NCBI entrez gene - 406533     See in Manteia.
RefSeq - NM_213250
RefSeq Peptide - NP_998415
swissprot - Q6P3K7
ZFIN ID - ZDB-GENE-040426-2385
Ensembl - ENSDARG00000006125
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSNK1DENSGALG00000002719Gallus gallus
 CSNK1DENSG00000141551Homo sapiens
 Csnk1dENSMUSG00000025162Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q7T2E3 / csnk1da / casein kinase 1, delta a / CSNK1D* / P48730* / casein kinase 1 delta*ENSDARG0000000837088
csnk1e / casein kinase 1, epsilon / P49674* / Q9JMK2* / Z98749.3* / Casein kinase I isoform epsilon *ENSDARG0000004515081
csnk1a1 / casein kinase 1, alpha 1 / P48729* / Q8BK63* / Q8N752* / CSNK1A1L* / casein kinase 1 alpha 1 like*ENSDARG0000005267456
ttbk2a / tau tubulin kinase 2a / TTBK2* / Q3UVR3* / Q6IQ55* / tau tubulin kinase 2*ENSDARG0000000567030
ttbk1a / tau tubulin kinase 1a / TTBK1* / Q5TCY1* / Q6PCN3* / tau tubulin kinase 1*ENSDARG0000005601929
ttbk1b / tau tubulin kinase 1b / TTBK1* / Q5TCY1* / Q6PCN3* / tau tubulin kinase 1*ENSDARG0000005665929
ttbk2b / tau tubulin kinase 2b / TTBK2* / Q3UVR3* / Q6IQ55* / tau tubulin kinase 2*ENSDARG0000004302628


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR008271  Serine/threonine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily
 IPR017441  Protein kinase, ATP binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0006897 endocytosis IBA
 biological_processGO:0008360 regulation of cell shape IBA
 biological_processGO:0016055 Wnt signaling pathway IBA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0018105 peptidyl-serine phosphorylation IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
Regulation of PLK1 Activity at G2/M Transition
Loss of Nlp from mitotic centrosomes
Recruitment of mitotic centrosome proteins and complexes
Loss of proteins required for interphase microtubule organization from the centrosome
Recruitment of NuMA to mitotic centrosomes
Anchoring of the basal body to the plasma membrane
Major pathway of rRNA processing in the nucleolus and cytosol
AURKA Activation by TPX2


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000019581 uso1 / USO1 vesicle transport factor / O60763* / Q9Z1Z0* / USO1 vesicle docking factor*  / reaction
 ENSDARG00000029663 rab1ab / RAB1A, member RAS oncogene family b / Rab1* / RAB1A* / P62821* / P62820* / Ras-related protein Rab-1A * / RAB1A, member RAS oncogene family*  / reaction
 ENSDARG00000054807 sec13 / SEC13 homolog, nuclear pore and COPII coat complex component / P55735* / Q9D1M0*  / reaction
 ENSDARG00000063197 golga2 / golgin A2 / A6NMD2* / A7E2F4* / A8MQT2* / A8MZA4* / D6RF30* / F8WBI6* / A6NCC3* / A6NDK9* / A6NDN3* / H3BSY2* / I6L899* / P0CG33* / P0CJ92* / Q08379* / Q08AF8* / Q8N9W4* / Q921M4* ...  / reaction
 ENSDARG00000021082 sec31a / SEC31 homolog A, COPII coat complex component / O94979* / Q3UPL0* / Protein transport protein Sec31A *  / reaction
 ENSDARG00000071906 sec24b / SEC24 homolog B, COPII coat complex component / O95487* / Sec24 related gene family, member B (S. cerevisiae)*  / reaction
 ENSDARG00000103516 sec24c / SEC24 homolog C, COPII coat complex component / P53992* / Sec24 related gene family, member C (S. cerevisiae)*  / reaction
 ENSDARG00000100435 Q7SXP0 / sec22bb / SEC22 homolog B, vesicle trafficking protein b / SEC22B* / O08547* / O75396* / Vesicle-trafficking protein SEC22b * / SEC22 homolog B, vesicle trafficking protein (gene/p...  / reaction
 ENSDARG00000104230 Q7SZE5 / sec23a / Sec23 homolog A, COPII coat complex component / Q15436* / Q01405* / Protein transport protein Sec23A * / Sec23 homolog A, coat complex II component*  / reaction
 ENSDARG00000104375 sec24a / SEC24 homolog A, COPII coat complex component / O95486*  / reaction






 

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