ENSDARG00000006719


Danio rerio

Features
Gene ID: ENSDARG00000006719
  
Biological name :specc1la
  
Synonyms : Q2KN93 / specc1la / sperm antigen with calponin homology and coiled-coil domains 1-like a
  
Possible biological names infered from orthology : Q2KN98 / Q69YQ0 / SPECC1L / SPECC1L-ADORA2A / SPECC1L-ADORA2A readthrough (NMD candidate) / sperm antigen with calponin homology and coiled-coil domains 1 like
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 30600386
Gene end: 30664631
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000010292
Ensembl peptide - ENSDARP00000135296
NCBI entrez gene - 561775     See in Manteia.
RefSeq - NM_001039816
RefSeq Peptide - NP_001034905
swissprot - Q2KN93
ZFIN ID - ZDB-GENE-060810-139
Ensembl - ENSDARG00000006719
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SPECC1LENSGALG00000006648Gallus gallus
 Q69YQ0ENSG00000100014Homo sapiens
 SPECC1L-ADORA2AENSG00000258555Homo sapiens
 Q2KN98ENSMUSG00000033444Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
specc1lb / sperm antigen with calponin homology and coiled-coil domains 1-like b / Q69YQ0* / Q2KN98* / SPECC1L* / SPECC1L-ADORA2A* / SPECC1L-ADORA2A readthrough (NMD candidate)* / sperm ant...ENSDARG0000004223267
specc1 / sperm antigen with calponin homology and coiled-coil domains 1 / Q5M775* / Q5SXY1*ENSDARG0000002948036
si:ch211-195o20.7ENSDARG0000008922111
F1QH17 / mical3a / microtubule associated monooxygenase, calponin and LIM domain containing 3a / MICAL3* / Q7RTP6* / Q8CJ19* / [F-actin]-monooxygenase MICAL3 * / microtubule associated mono...ENSDARG0000009701711
F1RA39 / mical2b / microtubule associated monooxygenase, calponin and LIM domain containing 2b / Q8BML1* / MICAL2* / O94851* / Q6ZW33* / [F-actin]-monooxygenase MICAL2 * / microtubule assoc...ENSDARG000000203959
F1QWK4 / mical3b / microtubule associated monooxygenase, calponin and LIM domain containing 3b / MICAL3* / Q7RTP6* / Q8CJ19* / [F-actin]-monooxygenase MICAL3 * / microtubule associated mono...ENSDARG000000947329
E7F9T0 / mical1 / microtubule associated monooxygenase, calponin and LIM domain containing 1 / Q8TDZ2* / Q8VDP3* / Mus musculus microtubule associated monooxygenase, calponin and LIM domain...ENSDARG000000118098
mical2a / microtubule associated monooxygenase, calponin and LIM domain containing 2a / Q6ZW33* / MICAL2* / O94851* / microtubule associated monooxygenase, calponin and LIM domain containing 2*ENSDARG000000756087
ehbp1l1a / EH domain binding protein 1-like 1a / Q8N3D4* / EHBP1L1* / EH domain binding protein 1 like 1* / EH domain-binding protein 1-like protein 1 isoform C *ENSDARG000000573536
micall2b / mical-like 2b / Q3TN34* / Q8IY33* / MICALL2* / MICAL like 2* / MICAL-like protein 2 *ENSDARG000000178345
ehbp1 / EH domain binding protein 1 / Q69ZW3* / Q8NDI1*ENSDARG000000436435
ehbp1l1b / EH domain binding protein 1-like 1b / Q8N3D4* / EHBP1L1* / EH domain binding protein 1 like 1* / EH domain-binding protein 1-like protein 1 isoform C *ENSDARG000000798955
micall1a / MICAL-like 1aENSDARG000000798114
micall1b.2 / MICAL like 1b, duplicate 2ENSDARG000000870164
micall2a / mical-like 2a / Q3TN34* / Q8IY33* / MICALL2* / MICAL like 2* / MICAL-like protein 2 *ENSDARG000001023664
mical3a / microtubule associated monooxygenase, calponin and LIM domain containing 3a / Q9D5U9* / Micalcl* / AC132392.1* / MICAL C-terminal-like protein *ENSDARG000000219793
smtnb / smoothelin bENSDARG000000594423
smtnl / smoothelin, like / SMTNL2* / Q2TAL5* / Q8CI12* / smoothelin like 2* / Smoothelin-like protein 2 *ENSDARG000000556322
smtnl1 / smoothelin-like 1ENSDARG000000412571
smtna / smoothelin a / A8MU46* / Q99LM3* / SMTNL1* / smoothelin like 1* / Smoothelin-like protein 1 *ENSDARG000000746521


Protein motifs (from Interpro)
Interpro ID Name
 IPR001715  Calponin homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0051301 cell division IEA
 biological_processGO:0060325 face morphogenesis IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005819 spindle IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005921 gap junction IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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