ENSDARG00000011809


Danio rerio

Features
Gene ID: ENSDARG00000011809
  
Biological name :mical1
  
Synonyms : E7F9T0 / mical1 / microtubule associated monooxygenase, calponin and LIM domain containing 1
  
Possible biological names infered from orthology : Mus musculus microtubule associated monooxygenase, calponin and LIM domain containing 1 (Mical1), transcript variant 4, mRNA. / Q8TDZ2 / Q8VDP3
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 39461989
Gene end: 39528988
  
Corresponding Affymetrix probe sets: Dr.23512.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000154178
Ensembl peptide - ENSDARP00000121526
Ensembl peptide - ENSDARP00000155850
NCBI entrez gene - 568573     See in Manteia.
RefSeq - NM_001316730
RefSeq - XM_003201226
RefSeq Peptide - NP_001303659
swissprot - H9KUX2
swissprot - E7F9T0
ZFIN ID - ZDB-GENE-081022-3
Ensembl - ENSDARG00000011809
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MICAL1ENSGALG00000032190Gallus gallus
 MICAL1ENSG00000135596Homo sapiens
 Mical1ENSMUSG00000019823Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
F1QH17 / mical3a / microtubule associated monooxygenase, calponin and LIM domain containing 3a / MICAL3* / Q7RTP6* / Q8CJ19* / [F-actin]-monooxygenase MICAL3 * / microtubule associated mono...ENSDARG0000009701744
F1QWK4 / mical3b / microtubule associated monooxygenase, calponin and LIM domain containing 3b / MICAL3* / Q7RTP6* / Q8CJ19* / [F-actin]-monooxygenase MICAL3 * / microtubule associated mono...ENSDARG0000009473241
F1RA39 / mical2b / microtubule associated monooxygenase, calponin and LIM domain containing 2b / Q8BML1* / MICAL2* / O94851* / Q6ZW33* / [F-actin]-monooxygenase MICAL2 * / microtubule assoc...ENSDARG0000002039540
mical2a / microtubule associated monooxygenase, calponin and LIM domain containing 2a / Q6ZW33* / MICAL2* / O94851* / microtubule associated monooxygenase, calponin and LIM domain containing 2*ENSDARG0000007560832
mical3a / microtubule associated monooxygenase, calponin and LIM domain containing 3a / Q9D5U9* / Micalcl* / AC132392.1* / MICAL C-terminal-like protein *ENSDARG0000002197911
micall2b / mical-like 2b / Q3TN34* / Q8IY33* / MICALL2* / MICAL like 2* / MICAL-like protein 2 *ENSDARG0000001783410
ehbp1 / EH domain binding protein 1 / Q69ZW3* / Q8NDI1*ENSDARG0000004364310
ehbp1l1a / EH domain binding protein 1-like 1a / Q8N3D4* / EHBP1L1* / EH domain binding protein 1 like 1* / EH domain-binding protein 1-like protein 1 isoform C *ENSDARG0000005735310
micall1a / MICAL-like 1aENSDARG0000007981110
ehbp1l1b / EH domain binding protein 1-like 1b / Q8N3D4* / EHBP1L1* / EH domain binding protein 1 like 1* / EH domain-binding protein 1-like protein 1 isoform C *ENSDARG0000007989510
micall2a / mical-like 2a / Q3TN34* / Q8IY33* / MICALL2* / MICAL like 2* / MICAL-like protein 2 *ENSDARG0000010236610
micall1b.2 / MICAL like 1b, duplicate 2ENSDARG000000870169
Q2KN93 / specc1la / sperm antigen with calponin homology and coiled-coil domains 1-like a / Q2KN98* / Q69YQ0* / SPECC1L* / SPECC1L-ADORA2A* / SPECC1L-ADORA2A readthrough (NMD candidate)* / ...ENSDARG000000067197
specc1 / sperm antigen with calponin homology and coiled-coil domains 1 / Q5M775* / Q5SXY1*ENSDARG000000294807
specc1lb / sperm antigen with calponin homology and coiled-coil domains 1-like b / Q69YQ0* / Q2KN98* / SPECC1L* / SPECC1L-ADORA2A* / SPECC1L-ADORA2A readthrough (NMD candidate)* / sperm ant...ENSDARG000000422327
smtnl / smoothelin, like / SMTNL2* / Q2TAL5* / Q8CI12* / smoothelin like 2* / Smoothelin-like protein 2 *ENSDARG000000556326
smtnl1 / smoothelin-like 1ENSDARG000000412575
smtnb / smoothelin bENSDARG000000594425
smtna / smoothelin a / A8MU46* / Q99LM3* / SMTNL1* / smoothelin like 1* / Smoothelin-like protein 1 *ENSDARG000000746523
si:ch211-195o20.7ENSDARG000000892213


Protein motifs (from Interpro)
Interpro ID Name
 IPR001715  Calponin homology domain
 IPR001781  Zinc finger, LIM-type
 IPR022735  bMERB domain
 IPR023753  FAD/NAD(P)-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0019417 sulfur oxidation ISS
 biological_processGO:0030042 actin filament depolymerization ISS
 biological_processGO:0055114 oxidation-reduction process ISS
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005856 cytoskeleton IEA
 molecular_functionGO:0003779 actin binding ISS
 molecular_functionGO:0004497 monooxygenase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen ISS
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0071949 FAD binding ISS


Pathways (from Reactome)
Pathway description
Factors involved in megakaryocyte development and platelet production


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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