ENSDARG00000059442


Danio rerio

Features
Gene ID: ENSDARG00000059442
  
Biological name :smtnb
  
Synonyms : smoothelin b / smtnb
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 69289990
Gene end: 69316206
  
Corresponding Affymetrix probe sets: Dr.18344.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000077049
Ensembl peptide - ENSDARP00000116548
Ensembl peptide - ENSDARP00000127798
Ensembl peptide - ENSDARP00000144888
Ensembl peptide - ENSDARP00000146342
swissprot - F1Q558
swissprot - F1QHB6
swissprot - X1WC55
ZFIN ID - ZDB-GENE-070912-2
Ensembl - ENSDARG00000059442
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
smtnl / smoothelin, like / SMTNL2* / Q2TAL5* / Q8CI12* / smoothelin like 2* / Smoothelin-like protein 2 *ENSDARG0000005563225
smtnl1 / smoothelin-like 1ENSDARG0000004125723
smtna / smoothelin a / A8MU46* / Q99LM3* / SMTNL1* / smoothelin like 1* / Smoothelin-like protein 1 *ENSDARG0000007465218
ehbp1l1b / EH domain binding protein 1-like 1b / Q8N3D4* / EHBP1L1* / EH domain binding protein 1 like 1* / EH domain-binding protein 1-like protein 1 isoform C *ENSDARG0000007989515
ehbp1l1a / EH domain binding protein 1-like 1a / Q8N3D4* / EHBP1L1* / EH domain binding protein 1 like 1* / EH domain-binding protein 1-like protein 1 isoform C *ENSDARG0000005735314
E7F9T0 / mical1 / microtubule associated monooxygenase, calponin and LIM domain containing 1 / Q8TDZ2* / Q8VDP3* / Mus musculus microtubule associated monooxygenase, calponin and LIM domain...ENSDARG0000001180913
F1RA39 / mical2b / microtubule associated monooxygenase, calponin and LIM domain containing 2b / Q8BML1* / MICAL2* / O94851* / Q6ZW33* / [F-actin]-monooxygenase MICAL2 * / microtubule assoc...ENSDARG0000002039513
F1QWK4 / mical3b / microtubule associated monooxygenase, calponin and LIM domain containing 3b / MICAL3* / Q7RTP6* / Q8CJ19* / [F-actin]-monooxygenase MICAL3 * / microtubule associated mono...ENSDARG0000009473213
F1QH17 / mical3a / microtubule associated monooxygenase, calponin and LIM domain containing 3a / MICAL3* / Q7RTP6* / Q8CJ19* / [F-actin]-monooxygenase MICAL3 * / microtubule associated mono...ENSDARG0000009701713
mical2a / microtubule associated monooxygenase, calponin and LIM domain containing 2a / Q6ZW33* / MICAL2* / O94851* / microtubule associated monooxygenase, calponin and LIM domain containing 2*ENSDARG0000007560812
micall1a / MICAL-like 1aENSDARG0000007981112
micall2b / mical-like 2b / Q3TN34* / Q8IY33* / MICALL2* / MICAL like 2* / MICAL-like protein 2 *ENSDARG0000001783411
ehbp1 / EH domain binding protein 1 / Q69ZW3* / Q8NDI1*ENSDARG0000004364311
micall2a / mical-like 2a / Q3TN34* / Q8IY33* / MICALL2* / MICAL like 2* / MICAL-like protein 2 *ENSDARG0000010236611
micall1b.2 / MICAL like 1b, duplicate 2ENSDARG0000008701610
Q2KN93 / specc1la / sperm antigen with calponin homology and coiled-coil domains 1-like a / Q2KN98* / Q69YQ0* / SPECC1L* / SPECC1L-ADORA2A* / SPECC1L-ADORA2A readthrough (NMD candidate)* / ...ENSDARG000000067197
specc1lb / sperm antigen with calponin homology and coiled-coil domains 1-like b / Q69YQ0* / Q2KN98* / SPECC1L* / SPECC1L-ADORA2A* / SPECC1L-ADORA2A readthrough (NMD candidate)* / sperm ant...ENSDARG000000422327
specc1 / sperm antigen with calponin homology and coiled-coil domains 1 / Q5M775* / Q5SXY1*ENSDARG000000294806
si:ch211-195o20.7ENSDARG000000892212
mical3a / microtubule associated monooxygenase, calponin and LIM domain containing 3a / Q9D5U9* / Micalcl* / AC132392.1* / MICAL C-terminal-like protein *ENSDARG000000219791


Protein motifs (from Interpro)
Interpro ID Name
 IPR001715  Calponin homology domain
 IPR022189  Smoothelin


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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