ENSDARG00000006837


Danio rerio

Features
Gene ID: ENSDARG00000006837
  
Biological name :mycn
  
Synonyms : mycn / MYCN proto-oncogene, bHLH transcription factor
  
Possible biological names infered from orthology : N-myc proto-onco protein / P03966 / P04198
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 33294428
Gene end: 33299384
  
Corresponding Affymetrix probe sets: Dr.4845.1.A1_at (Zebrafish Array)   Dr.4845.2.S1_at (Zebrafish Array)   NM_212614_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000026640
NCBI entrez gene - 252851     See in Manteia.
RefSeq - NM_212614
RefSeq Peptide - NP_997779
swissprot - A0A0A0MPF8
ZFIN ID - ZDB-GENE-020711-1
Ensembl - ENSDARG00000006837
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MYCNENSGALG00000016462Gallus gallus
 MYCNENSG00000134323Homo sapiens
 MycnENSMUSG00000037169Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
myca / MYC proto-oncogene, bHLH transcription factor a / MYC* / Bmyc* / P01106* / P01108* / Q6P8Z1* / Protein B-Myc * / myelocytomatosis oncogene* / MYC proto-oncogene, bHLH transcription factor*ENSDARG0000004569534
mycb / Q7ZVS9 / MYC proto-oncogene, bHLH transcription factor b / MYC* / Bmyc* / P01106* / P01108* / Q6P8Z1* / Protein B-Myc * / myelocytomatosis oncogene* / MYC proto-oncogene, bHLH transc...ENSDARG0000000724131
myclb / Q1LWL8 / MYCL proto-oncogene, bHLH transcription factor b / MYCL* / P10166* / P12524* / Protein L-Myc * / MYCL proto-oncogene, bHLH transcription factor*ENSDARG0000003495625
mycla / Q9PSI9 / MYCL proto-oncogene, bHLH transcription factor a / MYCL* / P10166* / P12524* / Protein L-Myc * / MYCL proto-oncogene, bHLH transcription factor*ENSDARG0000000600315
mych / myelocytomatosis oncogene homologENSDARG0000007747314


Protein motifs (from Interpro)
Interpro ID Name
 IPR002418  Transcription regulator Myc
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR012682  Transcription regulator Myc, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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