ENSDARG00000077473


Danio rerio

Features
Gene ID: ENSDARG00000077473
  
Biological name :mych
  
Synonyms : mych / myelocytomatosis oncogene homolog
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 50451337
Gene end: 50454833
  
Corresponding Affymetrix probe sets: Dr.10228.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000102798
Ensembl peptide - ENSDARP00000128719
swissprot - F1QDI6
ZFIN ID - ZDB-GENE-030219-51
Ensembl - ENSDARG00000077473
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mycn / MYCN proto-oncogene, bHLH transcription factor / P03966* / P04198* / N-myc proto-onco protein *ENSDARG0000000683720
mycb / Q7ZVS9 / MYC proto-oncogene, bHLH transcription factor b / MYC* / Bmyc* / P01106* / P01108* / Q6P8Z1* / Protein B-Myc * / myelocytomatosis oncogene* / MYC proto-oncogene, bHLH transc...ENSDARG0000000724119
myca / MYC proto-oncogene, bHLH transcription factor a / MYC* / Bmyc* / P01106* / P01108* / Q6P8Z1* / Protein B-Myc * / myelocytomatosis oncogene* / MYC proto-oncogene, bHLH transcription factor*ENSDARG0000004569519
myclb / Q1LWL8 / MYCL proto-oncogene, bHLH transcription factor b / MYCL* / P10166* / P12524* / Protein L-Myc * / MYCL proto-oncogene, bHLH transcription factor*ENSDARG0000003495615
mycla / Q9PSI9 / MYCL proto-oncogene, bHLH transcription factor a / MYCL* / P10166* / P12524* / Protein L-Myc * / MYCL proto-oncogene, bHLH transcription factor*ENSDARG0000000600311


Protein motifs (from Interpro)
Interpro ID Name
 IPR002418  Transcription regulator Myc
 IPR003327  Leucine zipper, Myc
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR012682  Transcription regulator Myc, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0014032 neural crest cell development IMP
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000029 hindbrain hindbrain increased width , abnormal
Show

 ZFA:0000045 neural crest neural crest decreased thickness , abnormal
neural crest morphology , abnormal
Show

 ZFA:0000046 retinal neural layer retinal neural layer morphology , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000128 midbrain midbrain increased width , abnormal
Show

 ZFA:0000132 neural plate neural plate apoptotic , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

 ZFA:0001115 trunk trunk decreased length , abnormal
trunk increased width , abnormal
Show

 ZFA:0001117 post-vent region post-vent region decreased size , abnormal
Show

 ZFA:0001458 cranial cartilage cranial cartilage aplastic , abnormal
Show

 ZFA:0001613 pharyngeal arch 3-7 pharyngeal arch 3-7 aplastic , abnormal
Show

 ZFA:0009165 neural crest cell neural crest cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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