ENSDARG00000010555


Danio rerio

Features
Gene ID: ENSDARG00000010555
  
Biological name :pdha1b
  
Synonyms : pdha1b / pyruvate dehydrogenase E1 alpha 1 subunit b
  
Possible biological names infered from orthology : P08559 / P29803 / P35486 / P35487 / PDHA1 / PDHA2 / pyruvate dehydrogenase E1 alpha 1 / pyruvate dehydrogenase E1 alpha 1 subunit / pyruvate dehydrogenase E1 alpha 2 subunit / Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 24273371
Gene end: 24282427
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000012693
Ensembl peptide - ENSDARP00000121414
Ensembl peptide - ENSDARP00000110363
NCBI entrez gene - 436672     See in Manteia.
RefSeq - NM_001002399
RefSeq Peptide - NP_001002399
swissprot - E9QBJ0
swissprot - E7F9W7
swissprot - F1QBT9
ZFIN ID - ZDB-GENE-040718-96
Ensembl - ENSDARG00000010555
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PDHA1ENSGALG00000016430Gallus gallus
 PDHA1ENSG00000131828Homo sapiens
 PDHA2ENSG00000163114Homo sapiens
 Pdha1ENSMUSG00000031299Mus musculus
 Pdha2ENSMUSG00000047674Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pdha1a / pyruvate dehydrogenase E1 alpha 1 subunit a / PDHA1* / PDHA2* / P08559* / P29803* / P35486* / P35487* / pyruvate dehydrogenase E1 alpha 1* / pyruvate dehydrogenase E1 alpha 1 subun...ENSDARG0000001238785
bckdha / branched chain keto acid dehydrogenase E1, alpha polypeptide / P12694* / AC011462.1* / branched chain ketoacid dehydrogenase E1, alpha polypeptide*ENSDARG0000004055526


Protein motifs (from Interpro)
Interpro ID Name
 IPR001017  Dehydrogenase, E1 component
 IPR017597  Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y
 IPR029061  Thiamin diphosphate-binding fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006086 acetyl-CoA biosynthetic process from pyruvate IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005739 mitochondrion IBA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEA


Pathways (from Reactome)
Pathway description
Regulation of pyruvate dehydrogenase (PDH) complex
Glyoxylate metabolism and glycine degradation
Signaling by Retinoic Acid
Pyruvate metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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