ENSDARG00000014496


Danio rerio

Features
Gene ID: ENSDARG00000014496
  
Biological name :trpv6
  
Synonyms : transient receptor potential cation channel, subfamily V, member 6 / trpv6
  
Possible biological names infered from orthology : P69744 / Q91WD2 / Q9H1D0 / Q9NQA5 / transient receptor potential cation channel subfamily V member 5 / TRPV5
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 12294284
Gene end: 12319822
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000105890
Ensembl peptide - ENSDARP00000145071
Ensembl peptide - ENSDARP00000153297
NCBI entrez gene - 100000322     See in Manteia.
RefSeq - NM_001001849
RefSeq - XM_005173468
RefSeq - XM_005173469
RefSeq Peptide - NP_001001849
swissprot - F1QN56
ZFIN ID - ZDB-GENE-040624-12
Ensembl - ENSDARG00000014496
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000014746Gallus gallus
 TRPV5ENSG00000127412Homo sapiens
 TRPV6ENSG00000165125Homo sapiens
 Trpv5ENSMUSG00000036899Mus musculus
 Trpv6ENSMUSG00000029868Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trpv4 / transient receptor potential cation channel, subfamily V, member 4 / Q9EPK8* / Q9HBA0*ENSDARG0000006194127
trpv1 / transient receptor potential cation channel, subfamily V, member 1 / TRPV2* / Q9Y5S1* / Q9WTR1* / Q8NER1* / Q704Y3* / transient receptor potential cation channel subfamily V member 2*ENSDARG0000005988324


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR005821  Ion transport domain
 IPR008344  Transient receptor potential cation channel subfamily V member 5/6
 IPR020683  Ankyrin repeat-containing domain
 IPR024862  Transient receptor potential cation channel subfamily V


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0042539 hypotonic salinity response IDA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IGI
 biological_processGO:0051592 response to calcium ion IDA
 biological_processGO:0055074 calcium ion homeostasis IMP
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070509 calcium ion import IMP
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane ISS
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005262 calcium channel activity IMP


Pathways (from Reactome)
Pathway description
TRP channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000006 ball ball integument physical object quality , abnormal
Show

 ZFA:0000106 extension extension integument physical object quality , abnormal
Show

 ZFA:0000317 postcranial axial skeleton postcranial axial skeleton cartilaginous , abnormal
Show

 ZFA:0000354 gill gill integument physical object quality , abnormal
Show

 ZFA:0001200 corpuscles of Stannius corpuscles of Stannius cellular quality , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr