ENSDARG00000014531


Danio rerio

Features
Gene ID: ENSDARG00000014531
  
Biological name :atg4a
  
Synonyms : atg4a / autophagy related 4A, cysteine peptidase
  
Possible biological names infered from orthology : Atg4a-ps / autophagy related 4A, pseudogene / Cysteine protease ATG4A / Q8C9S8 / Q8WYN0
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 43485512
Gene end: 43510481
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000019179
Ensembl peptide - ENSDARP00000140027
NCBI entrez gene - 554140     See in Manteia.
swissprot - A0A0R4IXG1
swissprot - Q4VBK1
ZFIN ID - ZDB-GENE-050522-430
Ensembl - ENSDARG00000014531
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATG4AENSGALG00000008282Gallus gallus
 ATG4AENSG00000101844Homo sapiens
 Atg4aENSMUSG00000079418Mus musculus
 Atg4a-psENSMUSG00000087119Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atg4b / Q6DG88 / autophagy related 4B, cysteine peptidase / Q9Y4P1*ENSDARG0000005210457
atg4c / autophagy related 4C, cysteine peptidase / Q811C2* / Q96DT6* / Cysteine protease ATG4C *ENSDARG0000004437332
atg4da / autophagy related 4D, cysteine peptidase a / ATG4D* / Q8BGV9* / Q86TL0* / autophagy related 4D cysteine peptidase* / Cysteine protease ATG4D Cysteine protease ATG4D, mitochondrial*ENSDARG0000004354830
atg4db / autophagy related 4D, cysteine peptidase b / ATG4D* / Q8BGV9* / Q86TL0* / autophagy related 4D cysteine peptidase* / Cysteine protease ATG4D Cysteine protease ATG4D, mitochondrial*ENSDARG0000008814526


Protein motifs (from Interpro)
Interpro ID Name
 IPR005078  Peptidase C54
 IPR033474  Autophagin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IBA
 biological_processGO:0000422 autophagy of mitochondrion IBA
 biological_processGO:0006501 C-terminal protein lipidation IBA
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006612 protein targeting to membrane IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0044804 autophagy of nucleus IBA
 biological_processGO:0051697 protein delipidation IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0004197 cysteine-type endopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Macroautophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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