ENSDARG00000015563


Danio rerio

Features
Gene ID: ENSDARG00000015563
  
Biological name :zgc:123305
  
Synonyms : zgc:123305
  
Possible biological names infered from orthology : lipin 3 / LPIN3 / Phosphatidate phosphatase LPIN3 / Q99PI4 / Q9BQK8
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 1567446
Gene end: 1591002
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000081473
Ensembl peptide - ENSDARP00000067591
Ensembl peptide - ENSDARP00000143420
swissprot - A0A286Y8Y5
swissprot - E7EYV4
swissprot - F1RBG9
ZFIN ID - ZDB-GENE-051120-171
Ensembl - ENSDARG00000015563
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LPIN3ENSG00000132793Homo sapiens
 Lpin3ENSMUSG00000027412Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lpin2 / lipin 2 / Q92539* / Q99PI5* / Mus musculus lipin 2 (Lpin2), transcript variant 3, mRNA.*ENSDARG0000006121441
lpin1 / lipin 1 / Q14693* / Mus musculus lipin 1 (Lpin1), transcript variant 4, mRNA.*ENSDARG0000002023938
si:ch73-21k16.1 / LPIN1* / Q14693* / lipin 1* / Mus musculus lipin 1 (Lpin1), transcript variant 4, mRNA.*ENSDARG0000010338038


Protein motifs (from Interpro)
Interpro ID Name
 IPR007651  Lipin, N-terminal
 IPR013209  Lipin/Ned1/Smp2 (LNS2)
 IPR023214  HAD superfamily
 IPR031315  LNS2/PITP
 IPR031703  Lipin, middle domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009062 fatty acid catabolic process IBA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0019432 triglyceride biosynthetic process IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003713 transcription coactivator activity IBA
 molecular_functionGO:0008195 phosphatidate phosphatase activity IBA


Pathways (from Reactome)
Pathway description
Synthesis of PC
Synthesis of PE
Depolymerisation of the Nuclear Lamina
Triglyceride biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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