ENSDARG00000016789


Danio rerio

Features
Gene ID: ENSDARG00000016789
  
Biological name :zgc:152891
  
Synonyms : zgc:152891
  
Possible biological names infered from orthology : ALOX12B / ALOX15B / Alox8 / ALOXE3 / arachidonate 12-lipoxygenase, 12R type / arachidonate 15-lipoxygenase, type B / Arachidonate 8S-lipoxygenase / arachidonate lipoxygenase 3 / O15296 / O35936 / O70582 / O75342 / Q9BYJ1 / Q9WV07
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 31194980
Gene end: 31226045
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000023401
Ensembl peptide - ENSDARP00000144643
Ensembl peptide - ENSDARP00000146594
NCBI entrez gene - 767741     See in Manteia.
RefSeq - NM_001076710
RefSeq Peptide - NP_001070178
swissprot - F1QKM3
swissprot - Q08BZ2
ZFIN ID - ZDB-GENE-061013-229
Ensembl - ENSDARG00000016789
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ALOXE3ENSG00000179148Homo sapiens
 O15296ENSG00000179593Homo sapiens
 O75342ENSG00000179477Homo sapiens
 Alox8ENSMUSG00000020891Mus musculus
 Aloxe3ENSMUSG00000020892Mus musculus
 O70582ENSMUSG00000032807Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-17e16.9 / ALOX12* / P18054* / P39654* / P39655* / P55249* / ALOX15* / P16050* / Alox12e* / arachidonate 12-lipoxygenase* / arachidonate 15-lipoxygenase* / arachidonate lipoxygenase,...ENSDARG0000007378138
alox12 / arachidonate 12-lipoxygenaseENSDARG0000006946337
alox5a / arachidonate 5-lipoxygenase a / ALOX5* / P09917* / P48999* / arachidonate 5-lipoxygenase*ENSDARG0000005727336
alox5b.2 / arachidonate 5-lipoxygenase b, tandem duplicate 2 / ALOX5* / P09917* / P48999* / arachidonate 5-lipoxygenase*ENSDARG0000004308935
alox5b.3 / arachidonate 5-lipoxygenase b, tandem duplicate 3 / ALOX5* / P09917* / P48999* / arachidonate 5-lipoxygenase*ENSDARG0000006996635
alox5b.1 / arachidonate 5-lipoxygenase b, tandem duplicate 1 / ALOX5* / P09917* / P48999* / arachidonate 5-lipoxygenase*ENSDARG0000004308533


Protein motifs (from Interpro)
Interpro ID Name
 IPR000907  Lipoxygenase
 IPR001024  PLAT/LH2 domain
 IPR001885  Lipoxygenase, mammalian
 IPR013819  Lipoxygenase, C-terminal
 IPR020834  Lipoxygenase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of 12-eicosatetraenoic acid derivatives
Synthesis of 15-eicosatetraenoic acid derivatives


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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