ENSDARG00000018404


Danio rerio

Features
Gene ID: ENSDARG00000018404
  
Biological name :krt18
  
Synonyms : keratin 18 / krt18 / Q7ZTS4
  
Possible biological names infered from orthology : Keratin, type I cytoskeletal 18 / P05783 / P05784
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 10347851
Gene end: 10351754
  
Corresponding Affymetrix probe sets: Dr.1372.1.S1_at (Zebrafish Array)   NM_178437_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000110768
NCBI entrez gene - 352912     See in Manteia.
RefSeq - NM_178437
RefSeq Peptide - NP_848524
swissprot - Q7ZTS4
ZFIN ID - ZDB-GENE-030411-6
Ensembl - ENSDARG00000018404
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KRT18ENSG00000111057Homo sapiens
 Krt18ENSMUSG00000023043Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:77517 / KRT18* / P05783* / P05784* / keratin 18* / Keratin, type I cytoskeletal 18 *ENSDARG0000002861862
si:ch211-133j6.3 / KRT18 (1 of many) / KRT18* / P05783* / P05784* / keratin 18* / Keratin, type I cytoskeletal 18 *ENSDARG0000005833244
zgc:92380 / KRT18* / P05783* / P05784* / keratin 18* / Keratin, type I cytoskeletal 18 *ENSDARG0000004133942
zgc:171226 / KRT39* / KRT38* / KRT37* / KRT36* / KRT35* / KRT34* / KRT32* / KRT20* / KRT31* / KRT40* / Q6A163* / KRT33B* / O76009* / O76011* / O76013* / O76014* / O76015* / P35900* / Q14525...ENSDARG0000004497338
krt1-c5 / keratin, type 1, gene c5ENSDARG0000002697937
zgc:110712 / KRT39* / KRT38* / KRT37* / KRT36* / KRT35* / KRT34* / KRT32* / KRT20* / KRT31* / KRT40* / Q6A163* / KRT33B* / O76009* / O76011* / O76013* / O76014* / O76015* / P35900* / Q14525...ENSDARG0000001936536
si:ch211-243g18.2ENSDARG0000004426135
wu:fk65c09ENSDARG0000006904628


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR002957  Keratin, type I
 IPR018039  Intermediate filament protein, conserved site
 IPR027695  Keratin, type I cytoskeletal 18


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005882 intermediate filament IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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