ENSDARG00000018478


Danio rerio

Features
Gene ID: ENSDARG00000018478
  
Biological name :agxtb
  
Synonyms : agxtb / alanine-glyoxylate aminotransferase b
  
Possible biological names infered from orthology : AGXT / alanine-glyoxylate aminotransferase / O35423 / P21549 / Serine--pyruvate aminotransferase, mitochondrial
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 22676743
Gene end: 22688651
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000017257
NCBI entrez gene - 79378     See in Manteia.
RefSeq - NM_213162
RefSeq Peptide - NP_998327
swissprot - Q6PHK4
ZFIN ID - ZDB-GENE-010302-3
Ensembl - ENSDARG00000018478
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AGXTENSGALG00000020943Gallus gallus
 AGXTENSG00000172482Homo sapiens
 AgxtENSMUSG00000026272Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
agxta / alanine-glyoxylate aminotransferase a / AGXT* / O35423* / P21549* / alanine-glyoxylate aminotransferase* / Serine--pyruvate aminotransferase, mitochondrial *ENSDARG0000005209962


Protein motifs (from Interpro)
Interpro ID Name
 IPR000192  Aminotransferase class V domain
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015422  Pyridoxal phosphate-dependent transferase domain 1
 IPR015424  Pyridoxal phosphate-dependent transferase
 IPR020578  Aminotransferase class-V, pyridoxal-phosphate binding site
 IPR024169  Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0019265 glycine biosynthetic process, by transamination of glyoxylate IBA
 biological_processGO:0071391 cellular response to estrogen stimulus IDA
 cellular_componentGO:0005777 peroxisome IBA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004760 serine-pyruvate transaminase activity IBA
 molecular_functionGO:0008453 alanine-glyoxylate transaminase activity IBA
 molecular_functionGO:0008483 transaminase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Glyoxylate metabolism and glycine degradation
Peroxisomal protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000018478 agxtb / alanine-glyoxylate aminotransferase b / AGXT* / O35423* / P21549* / alanine-glyoxylate aminotransferase* / Serine--pyruvate aminotransferase, mitochondrial *  / complex
 ENSDARG00000052099 agxta / alanine-glyoxylate aminotransferase a / AGXT* / O35423* / P21549* / alanine-glyoxylate aminotransferase* / Serine--pyruvate aminotransferase, mitochondrial *  / complex






 

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