ENSDARG00000019614


Danio rerio

Features
Gene ID: ENSDARG00000019614
  
Biological name :jade3
  
Synonyms : jade3 / jade family PHD finger 3
  
Possible biological names infered from orthology : Protein Jade-3 / Q6IE82 / Q92613
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 37478765
Gene end: 37513133
  
Corresponding Affymetrix probe sets: Dr.5024.1.S1_at (Zebrafish Array)   NM_201652_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000019080
Ensembl peptide - ENSDARP00000120486
NCBI entrez gene - 322209     See in Manteia.
RefSeq - NM_201652
RefSeq Peptide - NP_970614
swissprot - F1Q6Z0
ZFIN ID - ZDB-GENE-030131-928
Ensembl - ENSDARG00000019614
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 JADE3ENSGALG00000016727Gallus gallus
 JADE3ENSG00000102221Homo sapiens
 Jade3ENSMUSG00000037315Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
jade1 / jade family PHD finger 1 / Q6IE81* / Q6ZPI0* / Protein Jade-1 *ENSDARG0000003370742
jade2 / jade family PHD finger 2 / Q6ZQF7* / Q9NQC1* / Mus musculus jade family PHD finger 2 (Jade2), transcript variant 1, mRNA.*ENSDARG0000005338939
brd1a / bromodomain containing 1a / BRD1* / O95696* / bromodomain containing 1*ENSDARG0000001359620
brd1b / bromodomain containing 1b / BRD1* / O95696* / bromodomain containing 1*ENSDARG0000005179820
brpf3a / bromodomain and PHD finger containing, 3a / BRPF3* / Q9ULD4* / bromodomain and PHD finger containing 3*ENSDARG0000007051320
brpf3b / bromodomain and PHD finger containing, 3b / BRPF3* / Q9ULD4* / bromodomain and PHD finger containing 3*ENSDARG0000007423820
brpf1 / bromodomain and PHD finger containing, 1 / P55201*ENSDARG0000010366519
mllt10 / MLLT10, histone lysine methyltransferase DOT1L cofactor / O54826* / P55197* / myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10*ENSDARG0000004540116
phf14 / PHD finger protein 14 / O94880* / Q9D4H9*ENSDARG0000006145815


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019542  Enhancer of polycomb-like, N-terminal
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger
 IPR034732  Extended PHD (ePHD) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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