ENSDARG00000051798


Danio rerio

Features
Gene ID: ENSDARG00000051798
  
Biological name :brd1b
  
Synonyms : brd1b / bromodomain containing 1b
  
Possible biological names infered from orthology : BRD1 / bromodomain containing 1 / O95696
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 29688671
Gene end: 29714525
  
Corresponding Affymetrix probe sets: Dr.18116.1.S1_at (Zebrafish Array)   Dr.22290.1.S1_at (Zebrafish Array)   NM_001083030_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000067969
Ensembl peptide - ENSDARP00000144102
NCBI entrez gene - 100009661     See in Manteia.
RefSeq - NM_001083030
RefSeq Peptide - NP_001076499
swissprot - F1R0J6
ZFIN ID - ZDB-GENE-070209-98
Ensembl - ENSDARG00000051798
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BRD1ENSGALG00000029379Gallus gallus
 BRD1ENSG00000100425Homo sapiens
 Brd1ENSMUSG00000022387Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
brd1a / bromodomain containing 1a / BRD1* / O95696* / bromodomain containing 1*ENSDARG0000001359657
brpf3b / bromodomain and PHD finger containing, 3b / BRPF3* / Q9ULD4* / bromodomain and PHD finger containing 3*ENSDARG0000007423843
brpf3a / bromodomain and PHD finger containing, 3a / BRPF3* / Q9ULD4* / bromodomain and PHD finger containing 3*ENSDARG0000007051340
brpf1 / bromodomain and PHD finger containing, 1 / P55201*ENSDARG0000010366535
jade3 / jade family PHD finger 3 / Q6IE82* / Q92613* / Protein Jade-3 *ENSDARG0000001961415
jade1 / jade family PHD finger 1 / Q6IE81* / Q6ZPI0* / Protein Jade-1 *ENSDARG0000003370714
mllt10 / MLLT10, histone lysine methyltransferase DOT1L cofactor / O54826* / P55197* / myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10*ENSDARG0000004540114
jade2 / jade family PHD finger 2 / Q6ZQF7* / Q9NQC1* / Mus musculus jade family PHD finger 2 (Jade2), transcript variant 1, mRNA.*ENSDARG0000005338914
phf14 / PHD finger protein 14 / O94880* / Q9D4H9*ENSDARG0000006145813


Protein motifs (from Interpro)
Interpro ID Name
 IPR001487  Bromodomain
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR018359  Bromodomain, conserved site
 IPR019542  Enhancer of polycomb-like, N-terminal
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger
 IPR034732  Extended PHD (ePHD) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Regulation of TP53 Activity through Acetylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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